RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 PKN1Q16512 942 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 TBC1D10BQ4KMP7 808 aaPredicted RBP3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 CBWD5Q5RIA9 395 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 UBXN11Q5T124 520 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 ZNF648Q5T619 568 aaPredicted RBP3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 TEDDM1Q5T9Z0 273 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 FAM205BPQ63HN1 556 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 ANKRD40Q6AI12 368 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 TBC1D3GQ6DHY5 549 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 TBC1D3CQ6IPX1 549 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 GRHL2Q6ISB3 625 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 DENND1BQ6P3S1 775 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 Q6ZSN1 163 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 TMTC3Q6ZXV5 915 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 B4GALNT4Q76KP1 1039 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 CAND1Q86VP6 1230 aaKnown RBP3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 P3H2Q8IVL5 708 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 TBC1D3Q8IZP1 549 aaPredicted RBP3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 OR8H2Q8N162 312 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 SYT8Q8NBV8 401 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 B3GALNT2Q8NCR0 500 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 LINS1Q8NG48 757 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 NPIPB3Q92617 1050 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 VPS50Q96JG6 964 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 PPP1R10Q96QC0 940 aaKnown RBP3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 SDF4Q9BRK5 362 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 ALOXE3Q9BYJ1 711 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 PDCL3Q9H2J4 239 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 SMYD2Q9NRG4 433 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 RAB21Q9UL25 225 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 TRPC5Q9UL62 973 aaPredicted RBP3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 SUFUQ9UMX1 484 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 GPR34Q9UPC5 381 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 PCDHA10Q9Y5I2 948 aa3.33□□□□□ -1.88
MTHFD1-212ENST00000555858 KRTAP23-1A1A580 65 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 AGAP5A6NIR3 686 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 PATE3B3GLJ2 98 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 M0QZQ0 153 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 TULP3O75386 442 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 TIPRLO75663 272 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 CDKL5O76039 1030 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 SCGB1D1O95968 90 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 ERBB2P04626 1255 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 PDHA1P08559 390 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 CYP3A4P08684 503 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 ALADP13716 330 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 CHN1P15882 459 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 PPP3CBP16298 524 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 ALOX12P18054 663 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 ACO1P21399 889 aaKnown RBP3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 GRK5P34947 590 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 LIPAP38571 399 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 STAT1P42224 750 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 RAD52P43351 418 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 RCAN1P53805 252 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 TLE3Q04726 772 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 RESTQ13127 1097 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 EIF2B5Q13144 721 aaKnown RBP3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 THOC5Q13769 683 aaKnown RBP3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 CAMK1Q14012 370 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 RRP1BQ14684 758 aaKnown RBP3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 SEC23BQ15437 767 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 CCNG2Q16589 344 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 NFIL3Q16649 462 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 PRICKLE4Q2TBC4 344 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 LRRC24Q50LG9 513 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 MCTP1Q6DN14 999 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 GLB1LQ6UWU2 654 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 CCDC129Q6ZRS4 1044 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 H1FNTQ75WM6 255 aaPredicted RBP3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 Q8N3U1 123 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 GALNT4Q8N4A0 578 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 NGEFQ8N5V2 710 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 NFKBIDQ8NI38 313 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 CXorf38Q8TB03 319 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 ZCCHC10Q8TBK6 192 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 FUBP1Q96AE4 644 aaKnown RBP3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 ARRDC3Q96B67 414 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 WDYHV1Q96HA8 205 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 DPCDQ9BVM2 203 aaPredicted RBP3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 PHF7Q9BWX1 381 aaPredicted RBP3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 LMAN2LQ9H0V9 348 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 CCDC68Q9H2F9 335 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 TAOK3Q9H2K8 898 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 STN1Q9H668 368 aaKnown RBP3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 PRKRIP1Q9H875 184 aaPredicted RBP3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 SYNPO2LQ9H987 977 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 IL21RQ9HBE5 538 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 AKIP1Q9NQ31 210 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 RCE1Q9Y256 329 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 MAP3K2Q9Y2U5 619 aa3.32□□□□□ -1.88
MTHFD1-212ENST00000555858 CCDC187A0A096LP49 1063 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 H3BNC9 293 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 TNPO2O14787 897 aaKnown RBP3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 TSPAN4O14817 238 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 SPRY2O43597 315 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 DHX16O60231 1041 aaKnown RBP3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 DOK2O60496 412 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 PMPCBO75439 489 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms