RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 SUN3Q8TAQ9 357 aa6.11□□□□□ -1.43
VRK1-205ENST00000555402 MYCBPAPQ8TBZ2 947 aa6.11□□□□□ -1.43
VRK1-205ENST00000555402 SPPL3Q8TCT6 385 aa6.11□□□□□ -1.43
VRK1-205ENST00000555402 CSGALNACT1Q8TDX6 532 aa6.11□□□□□ -1.43
VRK1-205ENST00000555402 XAGE5Q8WWM1 108 aa6.11□□□□□ -1.43
VRK1-205ENST00000555402 GOLGA1Q92805 767 aa6.11□□□□□ -1.43
VRK1-205ENST00000555402 R3HDM4Q96D70 268 aa6.11□□□□□ -1.43
VRK1-205ENST00000555402 FCRL4Q96PJ5 515 aa6.11□□□□□ -1.43
VRK1-205ENST00000555402 NUDT22Q9BRQ3 303 aa6.11□□□□□ -1.43
VRK1-205ENST00000555402 DPCDQ9BVM2 203 aaPredicted RBP6.11□□□□□ -1.43
VRK1-205ENST00000555402 RIC8AQ9NPQ8 531 aa6.11□□□□□ -1.43
VRK1-205ENST00000555402 FSCN3Q9NQT6 498 aa6.11□□□□□ -1.43
VRK1-205ENST00000555402 CCNL1Q9UK58 526 aaPredicted RBP6.11□□□□□ -1.43
VRK1-205ENST00000555402 RIMKLBQ9ULI2 386 aa6.11□□□□□ -1.43
VRK1-205ENST00000555402 CCDC151A5D8V7 595 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 HMGB1P1B2RPK0 211 aaPredicted RBP6.1□□□□□ -1.43
VRK1-205ENST00000555402 B9A039 149 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 SLC16A3O15427 465 aaKnown RBP6.1□□□□□ -1.43
VRK1-205ENST00000555402 FAM155BO75949 473 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 KRT38O76015 456 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 FESP07332 822 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 RHOP08100 348 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 SRGNP10124 158 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 DRD1P21728 446 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 GSTM5P46439 218 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 NXPH1P58417 271 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 FHL3Q13643 280 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 TREML2Q5T2D2 321 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 TSTD2Q5T7W7 516 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 TEDDM1Q5T9Z0 273 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 NFRKBQ6P4R8 1299 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 TMED8Q6PL24 325 aaPredicted RBP6.1□□□□□ -1.43
VRK1-205ENST00000555402 CRELD2Q6UXH1 353 aaPredicted RBP6.1□□□□□ -1.43
VRK1-205ENST00000555402 RAB11FIP4Q86YS3 637 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 METTL25Q8N6Q8 603 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 OR6Y1Q8NGX8 325 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 HMGB4Q8WW32 186 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 THAP4Q8WY91 577 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 FKBP10Q96AY3 582 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 DDX23Q9BUQ8 820 aaKnown RBP6.1□□□□□ -1.43
VRK1-205ENST00000555402 VPS45Q9NRW7 570 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 FLRT1Q9NZU1 646 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 PGAP2Q9UHJ9 254 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 FEM1BQ9UK73 627 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 DAPP1Q9UN19 280 aa6.1□□□□□ -1.43
VRK1-205ENST00000555402 COL15A1P39059 1388 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 EFCAB8A8MWE9 144 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 H0Y3Z8 333 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 WDR47O94967 919 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 CER1O95813 267 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 POLBP06746 335 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 TMEM225BP0DP42 221 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 CKMT1AP12532 417 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 RXRAP19793 462 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 CLCN2P51788 898 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 PDE1AP54750 535 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 SOX10P56693 466 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 EIF4A1P60842 406 aaKnown RBP6.09□□□□□ -1.43
VRK1-205ENST00000555402 CLCA4Q14CN2 919 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 KLHL22Q53GT1 634 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 TMEM196Q5HYL7 178 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 KAZNQ674X7 775 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 FCRLBQ6BAA4 426 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 KRT27Q7Z3Y8 459 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 MAVSQ7Z434 540 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 CPT1BQ92523 772 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 FBXL20Q96IG2 436 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 VPS50Q96JG6 964 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 WDR24Q96S15 920 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 VPS16Q9H269 839 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 ZNF69Q9UC07 566 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 C19orf53Q9UNZ5 99 aaPredicted RBP6.09□□□□□ -1.43
VRK1-205ENST00000555402 CRYL1Q9Y2S2 319 aa6.09□□□□□ -1.43
VRK1-205ENST00000555402 KIF28PB7ZC32 967 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 YY2O15391 372 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 MPPED1O15442 326 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 RPP40O75818 363 aaKnown RBP6.08□□□□□ -1.44
VRK1-205ENST00000555402 PRKCBP05771 671 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 CHRM2P08172 466 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 HTR7P34969 479 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 PBX1P40424 430 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 ACTR2P61160 394 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 BFSP2Q13515 415 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 ACOX1Q15067 660 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 FAM110CQ1W6H9 321 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 ZNF569Q5MCW4 686 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 ZNF618Q5T7W0 954 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 PEG10Q86TG7 708 aaKnown RBP6.08□□□□□ -1.44
VRK1-205ENST00000555402 LRRTM4Q86VH4 590 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 P3H2Q8IVL5 708 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 SOCS4Q8WXH5 440 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 MPP4Q96JB8 637 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 PGBD1Q96JS3 809 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 COG8Q96MW5 612 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 PRDM16Q9HAZ2 1276 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 IFT80Q9P2H3 777 aaPredicted RBP6.08□□□□□ -1.44
VRK1-205ENST00000555402 PDP2Q9P2J9 529 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 NFU1Q9UMS0 254 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 CNTN6Q9UQ52 1028 aa6.08□□□□□ -1.44
VRK1-205ENST00000555402 WNT6Q9Y6F9 365 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms