RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 CAV1Q03135 178 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 SOX4Q06945 474 aaPredicted RBP12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 STILQ15468 1287 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 SPRED3Q2MJR0 410 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 FASTKD1Q53R41 847 aaKnown RBP12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 SYPL2Q5VXT5 272 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 SPATA6LQ8N4H0 392 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 ERP27Q96DN0 273 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 LRRC4CQ9HCJ2 640 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 ADAMTS5Q9UNA0 930 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 F5P12259 2224 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 DNAH12Q6ZR08 3092 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 FSCN2O14926 492 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 STBD1O95210 358 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 TRUB2O95900 331 aaKnown RBP12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 CXCR3P49682 368 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 PRAMEP78395 509 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 CST9Q5W186 159 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 ZNF662Q6ZS27 426 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 KATNAL2Q8IYT4 538 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 ZDHHC14Q8IZN3 488 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 SOCS4Q8WXH5 440 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 MYLPFQ96A32 169 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 AGO3Q9H9G7 860 aaKnown RBP12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 PAK5Q9P286 719 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 PRKAG2Q9UGJ0 569 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 A6NNZ2 444 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 RNF103O00237 685 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 DNM1LO00429 736 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 DNALI1O14645 258 aaPredicted RBP12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 TRAPPC3O43617 180 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 TBX18O95935 607 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 PAEPP09466 180 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 NPR3P17342 541 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 GRIA1P42261 906 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 TWF1Q12792 350 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 DPYSL3Q14195 570 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 TUBB8Q3ZCM7 444 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 CFAP52Q8N1V2 620 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 BLOC1S5Q8TDH9 187 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 PLK2Q9NYY3 685 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 SLC17A6Q9P2U8 582 aa12.62□□□□□ -0.39
ARHGEF40-206ENST00000555232 ADCY6O43306 1168 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 ATG7O95352 703 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 ERVK-10P10266 1014 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 PSMB4P28070 264 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 GATMP50440 423 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 ZNF143P52747 638 aaPredicted RBP12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 ALDH18A1P54886 795 aaKnown RBP12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 FAAP100Q0VG06 881 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 HSP90AA5PQ58FG0 334 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 FOXR2Q6PJQ5 311 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 FAM228AQ86W67 206 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 LRRC6Q86X45 466 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 STMN2Q93045 179 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 HDAC11Q96DB2 347 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 PTPRHQ9HD43 1115 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 PSMC3IPQ9P2W1 217 aaPredicted RBP12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 OR12D3Q9UGF7 316 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 POLR2AP24928 1970 aaKnown RBP12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 EVPLQ92817 2033 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 TCRBV7S3A2A0A539 114 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 PABPN1LA6NDY0 278 aaKnown RBP12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 ARL5CA6NH57 179 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 YJEFN3A6XGL0 299 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 E7ENQ6 273 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 CCL22O00626 93 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 LTFP02788 710 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 ADRA1DP25100 572 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 CRYBB1P53674 252 aaPredicted RBP12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 LDLRAD1Q5T700 205 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 WLSQ5T9L3 541 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 PCSK9Q8NBP7 692 aaKnown RBP12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 DBF4BQ8NFT6 615 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 PCED1BQ96HM7 432 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 VCPIP1Q96JH7 1222 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 NOD2Q9HC29 1040 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 NT5MQ9NPB1 228 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 C2CD2Q9Y426 696 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 SOCS7O14512 581 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 CYP1A1P04798 512 aaPredicted RBP12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 ALDH2P05091 517 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 GPD2P43304 727 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 AUHQ13825 339 aaKnown RBP12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 ZNF235Q14590 738 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 KLHL38Q2WGJ6 581 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 BZW1Q7L1Q6 419 aaKnown RBP12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 C16orf59Q7L2K0 433 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 ARID3BQ8IVW6 561 aaPredicted RBP12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 TTC39CQ8N584 583 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 SMC1BQ8NDV3 1235 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 IFT43Q96FT9 208 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 MS4A4AQ96JQ5 239 aa12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 AFF4Q9UHB7 1163 aaKnown RBP12.61□□□□□ -0.39
ARHGEF40-206ENST00000555232 TTC24A2A3L6 582 aaPredicted RBP12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 TXNDC9O14530 226 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 ACADSBP45954 432 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 ANKRD20A8PQ5CZ79 823 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 UNC5BQ8IZJ1 945 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 OR52K1Q8NGK4 314 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms