RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 NT5DC4Q86YG4 428 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 OR6B3Q8NGW1 331 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 UBA3Q8TBC4 463 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 PTPRN2Q92932 1015 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 TSPYL2Q9H2G4 693 aaPredicted RBP10.29□□□□□ -0.76
PRKCH-211ENST00000555082 PCMTD2Q9NV79 361 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 SIGLEC16A6NMB1 481 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 KPNA7A9QM74 516 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 GSC2O15499 205 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 ITGB1P05556 798 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 CYP3A5P20815 502 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 AMPD1P23109 780 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 ACAT1P24752 427 aaKnown RBP10.29□□□□□ -0.76
PRKCH-211ENST00000555082 SSTR1P30872 391 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 ARSEP51690 589 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 LILRA4P59901 499 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 CTC1Q2NKJ3 1217 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 WDTC1Q8N5D0 677 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 PDCD7Q8N8D1 485 aaKnown RBP10.29□□□□□ -0.76
PRKCH-211ENST00000555082 CRISPLD2Q9H0B8 497 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 HIPK3Q9H422 1215 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 VRTNQ9H8Y1 702 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 CYTH4Q9UIA0 394 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 DERAQ9Y315 318 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 ACTL7BQ9Y614 415 aa10.29□□□□□ -0.76
PRKCH-211ENST00000555082 FRMPD3Q5JV73 1810 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 C9IYK1 514 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 RTN3O95197 1032 aaPredicted RBP10.28□□□□□ -0.76
PRKCH-211ENST00000555082 PSMG1O95456 288 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 SKIP12755 728 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 PLCB3Q01970 1234 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 SLC45A4Q5BKX6 768 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 CLLU1OSQ5K130 101 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 SYDE1Q6ZW31 735 aaPredicted RBP10.28□□□□□ -0.76
PRKCH-211ENST00000555082 TMCO2Q7Z6W1 182 aaPredicted RBP10.28□□□□□ -0.76
PRKCH-211ENST00000555082 MRPL10Q7Z7H8 261 aaKnown RBP10.28□□□□□ -0.76
PRKCH-211ENST00000555082 OSTM1Q86WC4 334 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 ZNF280BQ86YH2 543 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 MCOLN2Q8IZK6 566 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 ZCCHC9Q8N567 271 aaKnown RBP10.28□□□□□ -0.76
PRKCH-211ENST00000555082 TCP10LQ8TDR4 215 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 STMN2Q93045 179 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 CYTH2Q99418 400 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 BTBD10Q9BSF8 475 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 LRCH1Q9Y2L9 728 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 PRPF4O43172 522 aaKnown RBP eCLIP10.28□□□□□ -0.76
PRKCH-211ENST00000555082 CYP1A1P04798 512 aaPredicted RBP10.28□□□□□ -0.76
PRKCH-211ENST00000555082 TROVE2P10155 538 aaKnown RBP eCLIP10.28□□□□□ -0.76
PRKCH-211ENST00000555082 ITGB8P26012 769 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 KLRC2P26717 231 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 BRCC3P46736 316 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 BPIFB4P59827 614 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 PSMC1P62191 440 aaKnown RBP10.28□□□□□ -0.76
PRKCH-211ENST00000555082 NOMO3P69849 1222 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 LRRC26Q2I0M4 334 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 SYCP2LQ5T4T6 812 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 CYP4A22Q5TCH4 519 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 WSCD1Q658N2 575 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 ZNF598Q86UK7 904 aaKnown RBP10.28□□□□□ -0.76
PRKCH-211ENST00000555082 FBXO27Q8NI29 283 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 KBTBD7Q8WVZ9 684 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 TMEM176AQ96HP8 235 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 CLPTM1LQ96KA5 538 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 FAM81BQ96LP2 452 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 GBP5Q96PP8 586 aa10.28□□□□□ -0.76
PRKCH-211ENST00000555082 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.28□□□□□ -0.76
PRKCH-211ENST00000555082 C2CD2LO14523 706 aa10.27□□□□□ -0.76
PRKCH-211ENST00000555082 TYROBPO43914 113 aa10.27□□□□□ -0.76
PRKCH-211ENST00000555082 CCDC22O60826 627 aa10.27□□□□□ -0.76
PRKCH-211ENST00000555082 ZNF623O75123 536 aa10.27□□□□□ -0.76
PRKCH-211ENST00000555082 RNF8O76064 485 aa10.27□□□□□ -0.76
PRKCH-211ENST00000555082 BAG2O95816 211 aa10.27□□□□□ -0.76
PRKCH-211ENST00000555082 MAN1A1P33908 653 aa10.27□□□□□ -0.76
PRKCH-211ENST00000555082 TAF6P49848 677 aa10.27□□□□□ -0.76
PRKCH-211ENST00000555082 RABGGTBP53611 331 aa10.27□□□□□ -0.76
PRKCH-211ENST00000555082 SLC34A1Q06495 639 aa10.27□□□□□ -0.76
PRKCH-211ENST00000555082 BFSP2Q13515 415 aa10.27□□□□□ -0.76
PRKCH-211ENST00000555082 LAMB3Q13751 1172 aa10.27□□□□□ -0.76
PRKCH-211ENST00000555082 CCNG2Q16589 344 aa10.27□□□□□ -0.76
PRKCH-211ENST00000555082 MAIP1Q8WWC4 291 aa10.27□□□□□ -0.76
PRKCH-211ENST00000555082 NSL1Q96IY1 281 aa10.27□□□□□ -0.76
PRKCH-211ENST00000555082 CYLDQ9NQC7 956 aa10.27□□□□□ -0.76
PRKCH-211ENST00000555082 RGS18Q9NS28 235 aa10.27□□□□□ -0.76
PRKCH-211ENST00000555082 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.27□□□□□ -0.76
PRKCH-211ENST00000555082 SAE1Q9UBE0 346 aaPredicted RBP10.27□□□□□ -0.76
PRKCH-211ENST00000555082 BARX2Q9UMQ3 279 aaPredicted RBP10.27□□□□□ -0.76
PRKCH-211ENST00000555082 SMG5Q9UPR3 1016 aaKnown RBP10.27□□□□□ -0.76
PRKCH-211ENST00000555082 GIT1Q9Y2X7 761 aa10.27□□□□□ -0.76
PRKCH-211ENST00000555082 A8MXQ7 604 aa10.27□□□□□ -0.77
PRKCH-211ENST00000555082 ENPP3O14638 875 aa10.27□□□□□ -0.77
PRKCH-211ENST00000555082 USP1O94782 785 aa10.27□□□□□ -0.77
PRKCH-211ENST00000555082 RPLP2P05387 115 aaKnown RBP10.27□□□□□ -0.77
PRKCH-211ENST00000555082 ESRRAP11474 423 aaPredicted RBP10.27□□□□□ -0.77
PRKCH-211ENST00000555082 ETS2P15036 469 aa10.27□□□□□ -0.77
PRKCH-211ENST00000555082 PBX3P40426 434 aa10.27□□□□□ -0.77
PRKCH-211ENST00000555082 NSFP46459 744 aaKnown RBP10.27□□□□□ -0.77
PRKCH-211ENST00000555082 ARFIP2P53365 341 aa10.27□□□□□ -0.77
PRKCH-211ENST00000555082 KLF1Q13351 362 aaPredicted RBP10.27□□□□□ -0.77
PRKCH-211ENST00000555082 SLC24A5Q71RS6 500 aa10.27□□□□□ -0.77
PRKCH-211ENST00000555082 HACE1Q8IYU2 909 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms