RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ZSCAN9O15535 394 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-213ENST00000554776 DHHO43323 396 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 SNX2O60749 519 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 ITGA5P08648 1049 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 MYCLP12524 364 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-213ENST00000554776 CD19P15391 556 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 CREB1P16220 341 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 NPPBP16860 134 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 CNTFP26441 200 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 AKT1P31749 480 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 CCT5P48643 541 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 PRKAA2P54646 552 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 EIF4A1P60842 406 aaKnown RBP3.59□□□□□ -1.83
SCFD1-213ENST00000554776 DEUP1Q05D60 604 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 SRSF4Q08170 494 aaKnown RBP3.59□□□□□ -1.83
SCFD1-213ENST00000554776 NSUN2Q08J23 767 aaKnown RBP eCLIP3.59□□□□□ -1.83
SCFD1-213ENST00000554776 LMAN2Q12907 356 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 CUL4BQ13620 913 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 ATP1A4Q13733 1029 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 GRM4Q14833 912 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 ACOX1Q15067 660 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 ST3GAL2Q16842 350 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 SLC4A8Q2Y0W8 1093 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 BTBD16Q32M84 506 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 TMEM119Q4V9L6 283 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 PRAMEF17Q5VTA0 474 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 BCDIN3DQ7Z5W3 292 aaKnown RBP3.59□□□□□ -1.83
SCFD1-213ENST00000554776 GATAD2AQ86YP4 633 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 RASGRP3Q8IV61 690 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 CCDC117Q8IWD4 279 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-213ENST00000554776 TERB1Q8NA31 727 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 GCC1Q96CN9 775 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 UBXN10Q96LJ8 280 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 SNX18Q96RF0 628 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 MMS19Q96T76 1030 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 CIPCQ9C0C6 399 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 FSCN3Q9NQT6 498 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 TMOD4Q9NZQ9 345 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 NKX1-2Q9UD57 310 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-213ENST00000554776 ASAP1Q9ULH1 1129 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 DTNAQ9Y4J8 743 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 PNMA6EA0A0J9YXQ4 647 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 RRN3P2A6NIE6 340 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 SMIM22K7EJ46 135 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 TMPRSS11DO60235 418 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 CCNT2O60583 730 aaKnown RBP3.58□□□□□ -1.84
SCFD1-213ENST00000554776 ACTL6BO94805 426 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 WDR47O94967 919 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 VIPP01282 170 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 ANXA6P08133 673 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 CELA2AP08217 269 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 ITGA2BP08514 1039 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 CKMT1AP12532 417 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 APEHP13798 732 aaKnown RBP3.58□□□□□ -1.84
SCFD1-213ENST00000554776 HSD3B1P14060 373 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 ALDH18A1P54886 795 aaKnown RBP3.58□□□□□ -1.84
SCFD1-213ENST00000554776 ARL4CP56559 192 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 TUBA4AP68366 448 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 POU5F1BQ06416 359 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 AASDHQ4L235 1098 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-213ENST00000554776 ALFQ53S48 1182 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 KIAA1614Q5VZ46 1190 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 ZKSCAN2Q63HK3 967 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 ARL6IP4Q66PJ3 421 aaKnown RBP3.58□□□□□ -1.84
SCFD1-213ENST00000554776 GRHL2Q6ISB3 625 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 RINT1Q6NUQ1 792 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 CYP26C1Q6V0L0 522 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 ZNF66Q6ZN08 573 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 ANKRD18AQ8IVF6 992 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 FSTL5Q8N475 847 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-213ENST00000554776 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.58□□□□□ -1.84
SCFD1-213ENST00000554776 OTUD7AQ8TE49 926 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-213ENST00000554776 DAZAP1Q96EP5 407 aaKnown RBP3.58□□□□□ -1.84
SCFD1-213ENST00000554776 MCRS1Q96EZ8 462 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 ZSCAN31Q96LW9 406 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-213ENST00000554776 NAP1L4Q99733 375 aaKnown RBP3.58□□□□□ -1.84
SCFD1-213ENST00000554776 SEMA4CQ9C0C4 833 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 PABPC3Q9H361 631 aaKnown RBP3.58□□□□□ -1.84
SCFD1-213ENST00000554776 TAF1DQ9H5J8 278 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-213ENST00000554776 SEPSECSQ9HD40 501 aaKnown RBP3.58□□□□□ -1.84
SCFD1-213ENST00000554776 SNX15Q9NRS6 342 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 GGA3Q9NZ52 723 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 HERC5Q9UII4 1024 aaKnown RBP3.58□□□□□ -1.84
SCFD1-213ENST00000554776 LZTS1Q9Y250 596 aa3.58□□□□□ -1.84
SCFD1-213ENST00000554776 TCRBV5S1A1TA0A578 114 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 PRRT4C9JH25 899 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 IRAK2O43187 625 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 EXOC3O60645 756 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 PPP6R2O75170 966 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 TAF5LO75529 589 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 KRT38O76015 456 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 NTSR2O95665 410 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 COL3A1P02461 1466 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-213ENST00000554776 POLBP06746 335 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 TMEM225BP0DP42 221 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 PEPDP12955 493 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 ADRA1DP25100 572 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 PBX1P40424 430 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 FOXO1Q12778 655 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 RALBP1Q15311 655 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms