RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 HAPLN2Q9GZV7 340 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 MAF1Q9H063 256 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 CXCL16Q9H2A7 254 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 AGO4Q9HCK5 861 aaKnown RBP3.58□□□□□ -1.84
SLIRP-202ENST00000553981 POLR3BQ9NW08 1133 aaPredicted RBP3.58□□□□□ -1.84
SLIRP-202ENST00000553981 MIOSQ9NXC5 875 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 MAP3K20Q9NYL2 800 aaKnown RBP3.58□□□□□ -1.84
SLIRP-202ENST00000553981 KCMF1Q9P0J7 381 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 DLGAP2Q9P1A6 1054 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 DNAJB4Q9UDY4 337 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 PCDHA6Q9UN73 950 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 R4GN57 208 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 ZDBF2Q9HCK1 2354 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 SMIM35A0A1B0GVV1 85 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 BDP1A6H8Y1 2624 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 FAM221BA6H8Z2 402 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 B4DLN1 442 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 NCK2O43639 380 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 IPO13O94829 963 aaKnown RBP3.57□□□□□ -1.84
SLIRP-202ENST00000553981 DDHD2O94830 711 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 RHOBTB3O94955 611 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 NUDT3O95989 172 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 JUNP05412 331 aaKnown RBP3.57□□□□□ -1.84
SLIRP-202ENST00000553981 PCP11498 1178 aaKnown RBP3.57□□□□□ -1.84
SLIRP-202ENST00000553981 HNRNPLP14866 589 aaKnown RBP eCLIP3.57□□□□□ -1.84
SLIRP-202ENST00000553981 AOC1P19801 751 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 METAP2P50579 478 aaKnown RBP eCLIP3.57□□□□□ -1.847e-8■□□□□ 9.9
SLIRP-202ENST00000553981 MRPL12P52815 198 aaKnown RBP3.57□□□□□ -1.84
SLIRP-202ENST00000553981 NUCB1Q02818 461 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 ANGPT1Q15389 498 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 UGCGQ16739 394 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 CCDC142Q17RM4 750 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 RARS2Q5T160 578 aaKnown RBP3.57□□□□□ -1.84
SLIRP-202ENST00000553981 PRAMEF9Q5VWM5 478 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 NAIF1Q69YI7 327 aaPredicted RBP3.57□□□□□ -1.84
SLIRP-202ENST00000553981 TAF2Q6P1X5 1199 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 TRMT1LQ7Z2T5 733 aaKnown RBP3.57□□□□□ -1.84
SLIRP-202ENST00000553981 IQCA1Q86XH1 822 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 ECHDC2Q86YB7 292 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 ZNF280BQ86YH2 543 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 LRRC71Q8N4P6 559 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 SAMD3Q8N6K7 520 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 MRPL43Q8N983 215 aaKnown RBP3.57□□□□□ -1.84
SLIRP-202ENST00000553981 SUMF1Q8NBK3 374 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 EXOC6Q8TAG9 804 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 PROKR1Q8TCW9 393 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 ARL8AQ96BM9 186 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 C16orf92Q96LL3 132 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 TCEANC2Q96MN5 208 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 NEK1Q96PY6 1258 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 MYADMQ96S97 322 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 MPHOSPH6Q99547 160 aaKnown RBP3.57□□□□□ -1.84
SLIRP-202ENST00000553981 MXRA8Q9BRK3 442 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 SPZ1Q9BXG8 430 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 MRPL4Q9BYD3 311 aaKnown RBP3.57□□□□□ -1.84
SLIRP-202ENST00000553981 ZBP1Q9H171 429 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 SMARCAD1Q9H4L7 1026 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 RNF41Q9H4P4 317 aaPredicted RBP3.57□□□□□ -1.84
SLIRP-202ENST00000553981 TRIM39Q9HCM9 518 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 IGSF5Q9NSI5 407 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 MARCH5Q9NX47 278 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 ERAP1Q9NZ08 941 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 CACNG4Q9UBN1 327 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 DNAI1Q9UI46 699 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 PACSIN3Q9UKS6 424 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 PNMA2Q9UL42 364 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 SORCS3Q9UPU3 1222 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 GINS2Q9Y248 185 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 MTF2Q9Y483 593 aaPredicted RBP3.57□□□□□ -1.84
SLIRP-202ENST00000553981 HS3ST4Q9Y661 456 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 SQORQ9Y6N5 450 aa3.57□□□□□ -1.84
SLIRP-202ENST00000553981 CFAP54Q96N23 3096 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 NFASCO94856 1347 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 GRID2IPA4D2P6 1211 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 SH2B2O14492 632 aaPredicted RBP3.56□□□□□ -1.84
SLIRP-202ENST00000553981 IFIT3O14879 490 aaKnown RBP3.56□□□□□ -1.84
SLIRP-202ENST00000553981 RPS6KA5O75582 802 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 RFPL2O75678 378 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 STAM2O75886 525 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 STC2O76061 302 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 ABHD16AO95870 558 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 DCNP07585 359 aaKnown RBP3.56□□□□□ -1.84
SLIRP-202ENST00000553981 GALTP07902 379 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 CPA1P15085 419 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 CHMLP26374 656 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 KIR2DL3P43628 341 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 SLC11A1P49279 550 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 RBM25P49756 843 aaKnown RBP3.56□□□□□ -1.84
SLIRP-202ENST00000553981 GPC3P51654 580 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 BCAR1P56945 870 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 UBE3AQ05086 875 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 SERINC3Q13530 473 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 MTMR1Q13613 665 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 SPIDRQ14159 915 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 PTPAQ15257 358 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 ARHGAP44Q17R89 818 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 TTC38Q5R3I4 469 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 LY6G5CQ5SRR4 150 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 KIAA1841Q6NSI8 718 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 SWSAP1Q6NVH7 229 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms