RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ERVK-18Q9QC07 812 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 FAM205CA6NFA0 338 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 BHMG1C9JSJ3 638 aaPredicted RBP9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 KLRC1P26715 233 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 C9orf131Q5VYM1 1079 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 FAM91A1Q658Y4 838 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 DPP8Q6V1X1 898 aaPredicted RBP9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 ARHGEF19Q8IW93 802 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 TBC1D21Q8IYX1 336 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 PPM1NQ8N819 430 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 XAGE3Q8WTP9 111 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 TARS2Q9BW92 718 aaKnown RBP9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 USP44Q9H0E7 712 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 FAM25EA8MYX2 175 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 CALUO43852 315 aaPredicted RBP9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 ITIH2P19823 946 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 ACOT2P49753 483 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 CDK18Q07002 472 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 COPS6Q7L5N1 327 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 CAMK1DQ8IU85 385 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 AHI1Q8N157 1196 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 PPM1KQ8N3J5 372 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 SLC15A4Q8N697 577 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 ARL6IP6Q8N6S5 226 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 ZNF614Q8N883 585 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 POF1BQ8WVV4 589 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 SLX1AQ9BQ83 275 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 AFG3L2Q9Y4W6 797 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 TOP2AP11388 1531 aaKnown RBP9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 CDK13Q14004 1512 aaKnown RBP9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 CAMTA2O94983 1202 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 APOL3O95236 402 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 F8A1P23610 371 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 PSMB9P28065 219 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 SP4Q02446 784 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 ABRQ12979 859 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 NFYCQ13952 458 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 GALNT3Q14435 633 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 TIGD6Q17RP2 521 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 TMEM139Q8IV31 216 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 NRG4Q8WWG1 115 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 MARK4Q96L34 752 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 COPG2Q9UBF2 871 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 ZNF222Q9UK12 451 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 PRKAB1Q9Y478 270 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 CAPN14A8MX76 684 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 TM9SF1O15321 606 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 YKT6O15498 198 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 FGAP02671 866 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 GLAP06280 429 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 MTHFRP42898 656 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 ATP13A4Q4VNC1 1196 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 TIPARPQ7Z3E1 657 aaKnown RBP9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 ENGASEQ8NFI3 743 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 HDAC11Q96DB2 347 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 USB1Q9BQ65 265 aaKnown RBP9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 EIF2AK1Q9BQI3 630 aaKnown RBP9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 OR2B2Q9GZK3 357 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 USP29Q9HBJ7 922 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 KCNE2Q9Y6J6 123 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 TRIM49D1C9J1S8 452 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 PTGES3LE9PB15 166 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 H3BM21 787 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 H7C2Y5 167 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 DDX39AO00148 427 aaKnown RBP9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 KLHL18O94889 574 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 KLHL2O95198 593 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 ZNF182P17025 639 aaPredicted RBP9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 TBX2Q13207 712 aaPredicted RBP9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 CHMP1BQ7LBR1 199 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 EFL1Q7Z2Z2 1120 aaKnown RBP9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 ZSCAN29Q8IWY8 852 aaPredicted RBP9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 TMEM35BQ8NCS4 154 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 PIF1Q9H611 641 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 INTS13Q9NVM9 706 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 HCN4Q9Y3Q4 1203 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 E7ENX8 843 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 PROCP04070 461 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 ABCE1P61221 599 aaKnown RBP9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 KIF19Q2TAC6 998 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 ATP13A5Q4VNC0 1218 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 NEK8Q86SG6 692 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 DGKHQ86XP1 1220 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 CPA6Q8N4T0 437 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 NAT16Q8N8M0 369 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 FAM47BQ8NA70 645 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 XXYLT1Q8NBI6 393 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 FBXO25Q8TCJ0 367 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 PCNPQ8WW12 178 aaKnown RBP9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 MND1Q9BWT6 205 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 HOXC10Q9NYD6 342 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 REXO2Q9Y3B8 237 aaKnown RBP9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 PCDHGB1Q9Y5G3 927 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 TRAV6A0A075B6T7 132 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 ATMINO43313 823 aaPredicted RBP9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 ERVFC1P60507 584 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 GMFBP60983 142 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 EPS8Q12929 822 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 ELOAQ14241 798 aaKnown RBP9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 BTBD16Q32M84 506 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms