RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 PDGFCQ9NRA1 345 aa5.6□□□□□ -1.51
ATXN3-217ENST00000553287 ZNF70Q9UC06 446 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-217ENST00000553287 TRPC5Q9UL62 973 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-217ENST00000553287 CORO2BQ9UQ03 480 aa5.6□□□□□ -1.51
ATXN3-217ENST00000553287 HPSEQ9Y251 543 aa5.6□□□□□ -1.51
ATXN3-217ENST00000553287 BTBD3Q9Y2F9 522 aa5.6□□□□□ -1.51
ATXN3-217ENST00000553287 LRP5O75197 1615 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 TRPM2O94759 1503 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 ERBINQ96RT1 1412 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 KCNU1A8MYU2 1149 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 FOXN3O00409 490 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-217ENST00000553287 TMPRSS11DO60235 418 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 USP1O94782 785 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 APEHP13798 732 aaKnown RBP5.59□□□□□ -1.51
ATXN3-217ENST00000553287 PIK3CBP42338 1070 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 DAZAP2Q15038 168 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-217ENST00000553287 C4orf46Q504U0 113 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 TMEM63BQ5T3F8 832 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 RRAGBQ5VZM2 374 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 MZT2AQ6P582 158 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 TMEM65Q6PI78 240 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 SLC2A7Q6PXP3 512 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 USP49Q70CQ1 688 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 C1QL2Q7Z5L3 287 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 CNGA4Q8IV77 575 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 PNPLA8Q9NP80 782 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 CHPF2Q9P2E5 772 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 STEAP1Q9UHE8 339 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 RIMKLBQ9ULI2 386 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 SLC27A6Q9Y2P4 619 aa5.59□□□□□ -1.51
ATXN3-217ENST00000553287 NRXN3Q9Y4C0 1643 aa5.59□□□□□ -1.52
ATXN3-217ENST00000553287 UNC13BO14795 1591 aa5.59□□□□□ -1.52
ATXN3-217ENST00000553287 GLI3P10071 1580 aa5.59□□□□□ -1.52
ATXN3-217ENST00000553287 LMTK2Q8IWU2 1503 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 BCL9LQ86UU0 1499 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 METP08581 1390 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 XRN1Q8IZH2 1706 aaKnown RBP5.58□□□□□ -1.52
ATXN3-217ENST00000553287 CYP2D7A0A087X1C5 515 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 TMEM232C9JQI7 657 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 THAP12O43422 761 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 YY1P25490 414 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 ARHGAP25P42331 645 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 DEUP1Q05D60 604 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 DAG1Q14118 895 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 MORN5Q5VZ52 161 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 C12orf76Q8N812 135 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-217ENST00000553287 ATP11CQ8NB49 1132 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 RPL36ALQ969Q0 106 aaKnown RBP5.58□□□□□ -1.52
ATXN3-217ENST00000553287 ZDHHC12Q96GR4 267 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 VPS50Q96JG6 964 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 HS6ST2Q96MM7 605 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 PRSS22Q9GZN4 317 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 AS3MTQ9HBK9 375 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 ASAP1Q9ULH1 1129 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 FAM50BQ9Y247 325 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 PTPN23Q9H3S7 1636 aa5.58□□□□□ -1.52
ATXN3-217ENST00000553287 DAPK1P53355 1430 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 MYOM3Q5VTT5 1437 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 NCOA3Q9Y6Q9 1424 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 MARF1Q9Y4F3 1742 aaKnown RBP5.57□□□□□ -1.52
ATXN3-217ENST00000553287 A8MVJ9 347 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 SFPQP23246 707 aaKnown RBP eCLIP5.57□□□□□ -1.52
ATXN3-217ENST00000553287 MCM5P33992 734 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 CFHR3Q02985 330 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 ZNF543Q08ER8 600 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 KLF9Q13886 244 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-217ENST00000553287 ETFDHQ16134 617 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 COBLL1Q53SF7 1204 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 AWAT1Q58HT5 328 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 KLHDC7AQ5VTJ3 777 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 PAPD7Q5XG87 772 aaKnown RBP5.57□□□□□ -1.52
ATXN3-217ENST00000553287 C11orf87Q6NUJ2 197 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 ZNF813Q6ZN06 617 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 DCDC5Q6ZRR9 648 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 MAFAQ8NHW3 353 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-217ENST00000553287 SCARB1Q8WTV0 552 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 IQCDQ96DY2 449 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 FAM227BQ96M60 508 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 EFHD1Q9BUP0 239 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 ZCWPW1Q9H0M4 648 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 SLC52A1Q9NWF4 448 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 KLHL13Q9P2N7 655 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 VPS51Q9UID3 782 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 SCAF8Q9UPN6 1271 aaKnown RBP5.57□□□□□ -1.52
ATXN3-217ENST00000553287 C1orf167Q5SNV9 1468 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 BLMP54132 1417 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-217ENST00000553287 ADGRL3Q9HAR2 1447 aa5.57□□□□□ -1.52
ATXN3-217ENST00000553287 E9PCH4 1651 aa5.56□□□□□ -1.52
ATXN3-217ENST00000553287 H3BNC9 293 aa5.56□□□□□ -1.52
ATXN3-217ENST00000553287 CLIC1O00299 241 aa5.56□□□□□ -1.52
ATXN3-217ENST00000553287 DSCR3O14972 297 aa5.56□□□□□ -1.52
ATXN3-217ENST00000553287 AREL1O15033 823 aa5.56□□□□□ -1.52
ATXN3-217ENST00000553287 KPNA5O15131 536 aa5.56□□□□□ -1.52
ATXN3-217ENST00000553287 TP73O15350 636 aa5.56□□□□□ -1.52
ATXN3-217ENST00000553287 ATICP31939 592 aa5.56□□□□□ -1.52
ATXN3-217ENST00000553287 EIF4A1P60842 406 aaKnown RBP5.56□□□□□ -1.52
ATXN3-217ENST00000553287 HNRNPA0Q13151 305 aaKnown RBP5.56□□□□□ -1.52
ATXN3-217ENST00000553287 ST3GAL2Q16842 350 aa5.56□□□□□ -1.52
ATXN3-217ENST00000553287 RANBP10Q6VN20 620 aa5.56□□□□□ -1.52
ATXN3-217ENST00000553287 KRT28Q7Z3Y7 464 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms