RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 ELOVL2Q9NXB9 296 aa12.43□□□□□ -0.42
SNRPF-205ENST00000553192 IL37Q9NZH6 218 aa12.43□□□□□ -0.42
SNRPF-205ENST00000553192 CLEC4EQ9ULY5 219 aa12.43□□□□□ -0.42
SNRPF-205ENST00000553192 NBASA2RRP1 2371 aa12.42□□□□□ -0.42
SNRPF-205ENST00000553192 BLACEA4D250 179 aa12.42□□□□□ -0.42
SNRPF-205ENST00000553192 CLDN5O00501 218 aa12.42□□□□□ -0.42
SNRPF-205ENST00000553192 IL18RAPO95256 599 aa12.42□□□□□ -0.42
SNRPF-205ENST00000553192 PENKP01210 267 aaPredicted RBP12.42□□□□□ -0.42
SNRPF-205ENST00000553192 FAM87AP0C7U9 286 aa12.42□□□□□ -0.42
SNRPF-205ENST00000553192 WARSP23381 471 aaKnown RBP12.42□□□□□ -0.42
SNRPF-205ENST00000553192 NXPH1P58417 271 aa12.42□□□□□ -0.42
SNRPF-205ENST00000553192 RPS14P62263 151 aaKnown RBP12.42□□□□□ -0.42
SNRPF-205ENST00000553192 GTF2BQ00403 316 aa12.42□□□□□ -0.42
SNRPF-205ENST00000553192 FYB2Q5VWT5 728 aa12.42□□□□□ -0.42
SNRPF-205ENST00000553192 KRT79Q5XKE5 535 aa12.42□□□□□ -0.42
SNRPF-205ENST00000553192 EXTL1Q92935 676 aa12.42□□□□□ -0.42
SNRPF-205ENST00000553192 PRR11Q96HE9 360 aaPredicted RBP12.42□□□□□ -0.42
SNRPF-205ENST00000553192 SLC46A1Q96NT5 459 aa12.42□□□□□ -0.42
SNRPF-205ENST00000553192 KCNK16Q96T55 309 aa12.42□□□□□ -0.42
SNRPF-205ENST00000553192 SEMA3CQ99985 751 aa12.42□□□□□ -0.42
SNRPF-205ENST00000553192 TM6SF1Q9BZW5 370 aa12.42□□□□□ -0.42
SNRPF-205ENST00000553192 GDF3Q9NR23 364 aa12.42□□□□□ -0.42
SNRPF-205ENST00000553192 FBN2P35556 2912 aa12.42□□□□□ -0.42
SNRPF-205ENST00000553192 FAM92AA1XBS5 289 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 SIGLEC6O43699 453 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 OPA1O60313 960 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 JAK2O60674 1132 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 PLXNA2O75051 1894 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 CSO75390 466 aaKnown RBP12.41□□□□□ -0.42
SNRPF-205ENST00000553192 KRT19P08727 400 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 ARRB1P49407 418 aaPredicted RBP12.41□□□□□ -0.42
SNRPF-205ENST00000553192 ZNF131P52739 623 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 KCNJ12Q14500 433 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 HYIQ5T013 277 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 SERPINA13PQ6UXR4 307 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 Q6ZNB5 142 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 HS2ST1Q7LGA3 356 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 SPATS2Q86XZ4 545 aaKnown RBP12.41□□□□□ -0.42
SNRPF-205ENST00000553192 ZNF366Q8N895 744 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 NECAB1Q8N987 351 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 KRI1Q8N9T8 703 aaKnown RBP12.41□□□□□ -0.42
SNRPF-205ENST00000553192 NSUN7Q8NE18 718 aaKnown RBP12.41□□□□□ -0.42
SNRPF-205ENST00000553192 UCMAQ8WVF2 138 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 DEPDC7Q96QD5 511 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 PLIN2Q99541 437 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 REEP2Q9BRK0 252 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 SGK2Q9HBY8 427 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.41□□□□□ -0.421e-8■■■■□ 19.7
SNRPF-205ENST00000553192 KCND2Q9NZV8 630 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 ITGA11Q9UKX5 1188 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 ITPR2Q14571 2701 aa12.41□□□□□ -0.42
SNRPF-205ENST00000553192 TP53BP1Q12888 1972 aaPredicted RBP12.4□□□□□ -0.42
SNRPF-205ENST00000553192 C2CD3Q4AC94 2353 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 PMS2P1A4D2B8 440 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 CDRT15L2A8MXV6 281 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 TLR5O60602 858 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 RTN3O95197 1032 aaPredicted RBP12.4□□□□□ -0.42
SNRPF-205ENST00000553192 PLA2G4BP0C869 781 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 POU3F2P20265 443 aaPredicted RBP12.4□□□□□ -0.42
SNRPF-205ENST00000553192 CD38P28907 300 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 ASIC1P78348 528 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 RBP5P82980 135 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 FOXK1P85037 733 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 GUCY1B3Q02153 619 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 IGFBP7Q16270 282 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 ZSCAN23Q3MJ62 389 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 SLFN12LQ6IEE8 588 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 BRSK2Q8IWQ3 736 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 MRPL45Q9BRJ2 306 aaKnown RBP12.4□□□□□ -0.42
SNRPF-205ENST00000553192 B3GNT5Q9BYG0 378 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 ELOVL4Q9GZR5 314 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 NACA2Q9H009 215 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 TMEM245Q9H330 911 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 DPEP3Q9H4B8 488 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 ERVMER34-1Q9H9K5 563 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 SATB2Q9UPW6 733 aa12.4□□□□□ -0.42
SNRPF-205ENST00000553192 SPTBN1Q01082 2364 aaKnown RBP12.4□□□□□ -0.43
SNRPF-205ENST00000553192 ICE1Q9Y2F5 2266 aa12.39□□□□□ -0.43
SNRPF-205ENST00000553192 A0A1B0GVM2 712 aa12.39□□□□□ -0.43
SNRPF-205ENST00000553192 FAM47DPA6NHR8 397 aa12.39□□□□□ -0.43
SNRPF-205ENST00000553192 LZTS3O60299 673 aaPredicted RBP12.39□□□□□ -0.43
SNRPF-205ENST00000553192 SDC3O75056 442 aa12.39□□□□□ -0.43
SNRPF-205ENST00000553192 KLKB1P03952 638 aa12.39□□□□□ -0.43
SNRPF-205ENST00000553192 SCP2P22307 547 aa12.39□□□□□ -0.43
SNRPF-205ENST00000553192 SLC5A3P53794 718 aa12.39□□□□□ -0.43
SNRPF-205ENST00000553192 GALCP54803 685 aa12.39□□□□□ -0.43
SNRPF-205ENST00000553192 SRSF6Q13247 344 aaKnown RBP12.39□□□□□ -0.43
SNRPF-205ENST00000553192 EIF4HQ15056 248 aaKnown RBP12.39□□□□□ -0.43
SNRPF-205ENST00000553192 ZRSR1Q15695 479 aaKnown RBP12.39□□□□□ -0.43
SNRPF-205ENST00000553192 C3orf38Q5JPI3 329 aa12.39□□□□□ -0.43
SNRPF-205ENST00000553192 FAM26EQ8N5C1 309 aa12.39□□□□□ -0.43
SNRPF-205ENST00000553192 MYCT1Q8N699 235 aa12.39□□□□□ -0.43
SNRPF-205ENST00000553192 SKA1Q96BD8 255 aa12.39□□□□□ -0.43
SNRPF-205ENST00000553192 CCNL2Q96S94 520 aaPredicted RBP12.39□□□□□ -0.43
SNRPF-205ENST00000553192 FAM213AQ9BRX8 229 aa12.39□□□□□ -0.43
SNRPF-205ENST00000553192 CIPCQ9C0C6 399 aa12.39□□□□□ -0.43
SNRPF-205ENST00000553192 MTMR12Q9C0I1 747 aa12.39□□□□□ -0.43
SNRPF-205ENST00000553192 GZF1Q9H116 711 aaPredicted RBP12.39□□□□□ -0.43
SNRPF-205ENST00000553192 EPN3Q9H201 632 aa12.39□□□□□ -0.43
SNRPF-205ENST00000553192 PRSS16Q9NQE7 514 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms