RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 PCDHB18PQ96TA0 734 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 SEPT11Q9NVA2 429 aaKnown RBP12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 RRN3Q9NYV6 651 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 MARK1Q9P0L2 795 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 DLGAP2Q9P1A6 1054 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 AGO1Q9UL18 857 aaKnown RBP12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 CAPN11Q9UMQ6 739 aa12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 NDRG2Q9UN36 371 aaKnown RBP12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 MTF2Q9Y483 593 aaPredicted RBP12.21□□□□□ -0.45
TRAFD1-209ENST00000552896 EML5Q05BV3 1969 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 PI15O43692 258 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 CACNG3O60359 315 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 CALB1P05937 261 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 CHKAP35790 457 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 OPRD1P41143 372 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 MATKP42679 507 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 TBX4P57082 545 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 CDK17Q00537 523 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 GAD2Q05329 585 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 KLHL30Q0D2K2 578 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 PTP4A2Q12974 167 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 CCINQ13939 588 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 DCAF6Q58WW2 860 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 TMEM196Q5HYL7 178 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 DGKKQ5KSL6 1271 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 RHBDF2Q6PJF5 856 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 MON1BQ7L1V2 547 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 ARCQ7LC44 396 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 DENND1CQ8IV53 801 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 VSTM4Q8IW00 320 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 UNC45BQ8IWX7 931 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 ETFBKMTQ8IXQ9 262 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 DEFB106AQ8N104 65 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 CD101Q93033 1021 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 FCRL2Q96LA5 508 aaPredicted RBP12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 PRRX2Q99811 253 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 P2RY13Q9BPV8 354 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 C11orf70Q9BRQ4 267 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 KCNH6Q9H252 994 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 FAM204AQ9H8W3 233 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 WDR35Q9P2L0 1181 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 STOML2Q9UJZ1 356 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 LUC7L2Q9Y383 392 aaKnown RBP12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 HCN4Q9Y3Q4 1203 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 CKAP5Q14008 2032 aa12.2□□□□□ -0.46
TRAFD1-209ENST00000552896 GRAP2O75791 330 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 TRUB2O95900 331 aaKnown RBP12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 APOEP02649 317 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 DCNP07585 359 aaKnown RBP12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 CHRNB1P11230 501 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 DRD1P21728 446 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 NOS2P35228 1153 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 GRSF1Q12849 480 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 FZD5Q13467 585 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 EIF4EBP2Q13542 120 aaPredicted RBP12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 C2CD6Q53TS8 623 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 OTUD1Q5VV17 481 aaPredicted RBP12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 FSTL4Q6MZW2 842 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 ZNF571Q7Z3V5 609 aaPredicted RBP12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 SYNPOQ8N3V7 929 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 SLC30A5Q8TAD4 765 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 ADAM32Q8TC27 787 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 AZIN2Q96A70 460 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 SLC39A13Q96H72 371 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 ANP32EQ9BTT0 268 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 BBS2Q9BXC9 721 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 IRX2Q9BZI1 471 aaPredicted RBP12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 RBSNQ9H1K0 784 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 CHRDQ9H2X0 955 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 HAUS4Q9H6D7 363 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 TMEM51Q9NW97 253 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 ADAM22Q9P0K1 906 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 STAP1Q9ULZ2 295 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 BZW2Q9Y6E2 419 aaKnown RBP12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 CHD5Q8TDI0 1954 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 PLXND1Q9Y4D7 1925 aa12.19□□□□□ -0.46
TRAFD1-209ENST00000552896 FAM170AA1A519 330 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 NEDD8-MDP1E9PL57 170 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 GOLGA8SH3BPF8 625 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 GFRA2O00451 464 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 PENKP01210 267 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 SERPING1P05155 500 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 TPM1P09493 284 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 SLC2A3P11169 496 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 TYRP14679 529 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 TNFAIP3P21580 790 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 HNRNPH3P31942 346 aaKnown RBP12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 CASP14P31944 242 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 GBP1P32455 592 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 SLC11A2P49281 568 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 PITX1P78337 314 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 MTA1Q13330 715 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 ARID5BQ14865 1188 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 ANO4Q32M45 955 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 FBXO43Q4G163 708 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 PREPLQ4J6C6 727 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 TDRD12Q587J7 1177 aaKnown RBP12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 ADGRF1Q5T601 910 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms