RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 B4GALT5O43286 388 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 ADCY6O43306 1168 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 TOM1L1O75674 476 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 CIB2O75838 187 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 KRT19P08727 400 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 FGF3P11487 239 aaPredicted RBP5.61□□□□□ -1.51
LIMA1-212ENST00000552491 AOC1P19801 751 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 OSBPP22059 807 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 PEX2P28328 305 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 CRHR1P34998 444 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 GPD2P43304 727 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 MAGEA3P43357 314 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 RPL10AP62906 217 aaKnown RBP5.61□□□□□ -1.51
LIMA1-212ENST00000552491 AP2B1P63010 937 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 CNTN2Q02246 1040 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 WASHC5Q12768 1159 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 DLG1Q12959 904 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 HNRNPDQ14103 355 aaKnown RBP5.61□□□□□ -1.51
LIMA1-212ENST00000552491 TBCCQ15814 346 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 DNAL1Q4LDG9 190 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 FAM102AQ5T9C2 384 aaPredicted RBP5.61□□□□□ -1.51
LIMA1-212ENST00000552491 LGSNQ5TDP6 509 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 VWA5B1Q5TIE3 1220 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 SMYD5Q6GMV2 418 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 ZPBP2Q6X784 338 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 DPH6Q7L8W6 267 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 KRT27Q7Z3Y8 459 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 RSPH3Q86UC2 560 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 SESTD1Q86VW0 696 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 PDSS2Q86YH6 399 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 CRLF3Q8IUI8 442 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 PCDH19Q8TAB3 1148 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 FAM172AQ8WUF8 416 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 RXFP2Q8WXD0 754 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 APBB2Q92870 758 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 GORASP1Q9BQQ3 440 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 CCDC28BQ9BUN5 200 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 SPATA16Q9BXB7 569 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 NIFKQ9BYG3 293 aaKnown RBP5.61□□□□□ -1.51
LIMA1-212ENST00000552491 UBE2OQ9C0C9 1292 aaKnown RBP5.61□□□□□ -1.51
LIMA1-212ENST00000552491 C1orf21Q9H246 121 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 GPAMQ9HCL2 828 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 XAB2Q9HCS7 855 aaKnown RBP5.61□□□□□ -1.51
LIMA1-212ENST00000552491 MKS1Q9NXB0 559 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 DNAJC16Q9Y2G8 782 aa5.61□□□□□ -1.51
LIMA1-212ENST00000552491 EVPLQ92817 2033 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 IGKV6D-21A0A0A0MT36 114 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 C2CD4BA6NLJ0 364 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 M0QYV0 167 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 TRDMT1O14717 391 aaKnown RBP5.6□□□□□ -1.51
LIMA1-212ENST00000552491 OGTO15294 1046 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 ZMPSTE24O75844 475 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 OR6B1O95007 311 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 NFICP08651 508 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 CXCL8P10145 99 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 TFE3P19532 575 aaPredicted RBP5.6□□□□□ -1.51
LIMA1-212ENST00000552491 L1CAMP32004 1257 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 GABRB2P47870 512 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 CDK7P50613 346 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 ZNF143P52747 638 aaPredicted RBP5.6□□□□□ -1.51
LIMA1-212ENST00000552491 EPHB1P54762 984 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 AQP4P55087 323 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 CRADDP78560 199 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 PTPN11Q06124 597 aaPredicted RBP5.6□□□□□ -1.51
LIMA1-212ENST00000552491 SLC10A2Q12908 348 aaPredicted RBP5.6□□□□□ -1.51
LIMA1-212ENST00000552491 GRM1Q13255 1194 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 STX3Q13277 289 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 LIN52Q52LA3 116 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 FASTKD1Q53R41 847 aaKnown RBP5.6□□□□□ -1.51
LIMA1-212ENST00000552491 MAP1SQ66K74 1059 aaPredicted RBP5.6□□□□□ -1.51
LIMA1-212ENST00000552491 MBLAC2Q68D91 279 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 PGM2L1Q6PCE3 622 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 FBXL19Q6PCT2 694 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 ISLR2Q6UXK2 745 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 FAM183BPQ6ZVS7 135 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 DHDDSQ86SQ9 333 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 ARHGAP18Q8N392 663 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 LRRC71Q8N4P6 559 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 MTMR14Q8NCE2 650 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 HIPK4Q8NE63 616 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 OR6Y1Q8NGX8 325 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 CXorf38Q8TB03 319 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 RAB3IL1Q8TBN0 382 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 NCSTNQ92542 709 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 PPP2R3CQ969Q6 453 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 CCDC124Q96CT7 223 aaKnown RBP5.6□□□□□ -1.51
LIMA1-212ENST00000552491 RTP4Q96DX8 246 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 LRCH3Q96II8 777 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 PGLYRP2Q96PD5 576 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 EPAS1Q99814 870 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 ADPGKQ9BRR6 497 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 BCO2Q9BYV7 579 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 FRMD8Q9BZ67 464 aaPredicted RBP5.6□□□□□ -1.51
LIMA1-212ENST00000552491 PNPOQ9NVS9 261 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 THAP1Q9NVV9 213 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 PIH1D1Q9NWS0 290 aaKnown RBP5.6□□□□□ -1.51
LIMA1-212ENST00000552491 PAK5Q9P286 719 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 PACSIN3Q9UKS6 424 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 PCDHGB4Q9UN71 923 aa5.6□□□□□ -1.51
LIMA1-212ENST00000552491 SOX13Q9UN79 622 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms