RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 CCSER1Q9C0I3 900 aa5.73□□□□□ -1.49
HOXB3-213ENST00000552000 RNF38Q9H0F5 515 aa5.73□□□□□ -1.49
HOXB3-213ENST00000552000 CLMPQ9H6B4 373 aa5.73□□□□□ -1.49
HOXB3-213ENST00000552000 ABCB6Q9NP58 842 aa5.73□□□□□ -1.49
HOXB3-213ENST00000552000 DDX43Q9NXZ2 648 aaKnown RBP5.73□□□□□ -1.49
HOXB3-213ENST00000552000 TRPM5Q9NZQ8 1165 aa5.73□□□□□ -1.49
HOXB3-213ENST00000552000 CPSF3Q9UKF6 684 aaKnown RBP5.73□□□□□ -1.49
HOXB3-213ENST00000552000 GTF3C4Q9UKN8 822 aa5.73□□□□□ -1.49
HOXB3-213ENST00000552000 L1RE1Q9UN81 338 aa5.73□□□□□ -1.49
HOXB3-213ENST00000552000 BTBD3Q9Y2F9 522 aa5.73□□□□□ -1.49
HOXB3-213ENST00000552000 DERAQ9Y315 318 aa5.73□□□□□ -1.49
HOXB3-213ENST00000552000 A0A0B4J269 797 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 NPHP3-ACAD11A0A0J9YXS1 232 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 TEX51A0A1B0GUA7 166 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 A0A1B0GVT2 93 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 ZNF840PA6NDX5 716 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 A6NJY4 79 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 E9PAM4 449 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 BCAT2O15382 392 aaPredicted RBP5.72□□□□□ -1.49
HOXB3-213ENST00000552000 FLRT2O43155 660 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 RRP8O43159 456 aaKnown RBP5.72□□□□□ -1.49
HOXB3-213ENST00000552000 HUS1O60921 280 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 PIGRP01833 764 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 ZNF883P0CG24 379 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 MBL2P11226 248 aaPredicted RBP5.72□□□□□ -1.49
HOXB3-213ENST00000552000 NCAM1P13591 858 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 PFKLP17858 780 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 CD6P30203 668 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 NCKAP1LP55160 1127 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 MYL7Q01449 175 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 GAD2Q05329 585 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 MYO1EQ12965 1108 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 ORC2Q13416 577 aaPredicted RBP5.72□□□□□ -1.49
HOXB3-213ENST00000552000 SMAD1Q15797 465 aaKnown RBP5.72□□□□□ -1.49
HOXB3-213ENST00000552000 ANO4Q32M45 955 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 TAF1BQ53T94 588 aaPredicted RBP5.72□□□□□ -1.49
HOXB3-213ENST00000552000 TTC38Q5R3I4 469 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 KRT79Q5XKE5 535 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 BTBD8Q5XKL5 378 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 SLC39A4Q6P5W5 647 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 IL27RAQ6UWB1 636 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 GPR155Q7Z3F1 870 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 ETFBKMTQ8IXQ9 262 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 CHPFQ8IZ52 775 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 C4orf32Q8N8J7 132 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 TERB1Q8NA31 727 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 NSUN7Q8NE18 718 aaKnown RBP5.72□□□□□ -1.49
HOXB3-213ENST00000552000 DNASE2BQ8WZ79 361 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 NXPE2Q96DL1 559 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 TOE1Q96GM8 510 aaKnown RBP5.72□□□□□ -1.49
HOXB3-213ENST00000552000 FAM84AQ96KN4 292 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 MRGPRX1Q96LB2 322 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 ZNF560Q96MR9 790 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 PLIN2Q99541 437 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 PKMYT1Q99640 499 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 HNRNPABQ99729 332 aaKnown RBP5.72□□□□□ -1.49
HOXB3-213ENST00000552000 ACBD6Q9BR61 282 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 TIPINQ9BVW5 301 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 ASB7Q9H672 318 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 CD248Q9HCU0 757 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 DEC1Q9P2X7 70 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 KCNG1Q9UIX4 513 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 C2CD2Q9Y426 696 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 PCDHGB2Q9Y5G2 931 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 RAD54BQ9Y620 910 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 AK5Q9Y6K8 562 aa5.72□□□□□ -1.49
HOXB3-213ENST00000552000 SETD2Q9BYW2 2564 aaPredicted RBP5.71□□□□□ -1.49
HOXB3-213ENST00000552000 CAPN8A6NHC0 703 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 TISP43B9A030 160 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 WASH3PC4AMC7 463 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 ANKRD63C9JTQ0 380 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 H0YCG3 227 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 K7ENM7 598 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 CDK2AP1O14519 115 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 KCNK3O14649 394 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 HOXC11O43248 304 aaPredicted RBP5.71□□□□□ -1.5
HOXB3-213ENST00000552000 TNFSF14O43557 240 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 ATP2C2O75185 946 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 OLFM2O95897 454 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 JUPP14923 745 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 BDNFP23560 247 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 PCSK1P29120 753 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 POLR2BP30876 1174 aaKnown RBP5.71□□□□□ -1.5
HOXB3-213ENST00000552000 GRIK1P39086 918 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 PNPLA4P41247 253 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 MAGEA11P43364 429 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 CSNK1EP49674 416 aaKnown RBP5.71□□□□□ -1.5
HOXB3-213ENST00000552000 IRAK1P51617 712 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 PSMC1P62191 440 aaKnown RBP5.71□□□□□ -1.5
HOXB3-213ENST00000552000 CXADRP78310 365 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 CCDC173Q0VFZ6 552 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 IFRD2Q12894 506 aaPredicted RBP5.71□□□□□ -1.5
HOXB3-213ENST00000552000 KIF19Q2TAC6 998 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 CFAP221Q4G0U5 840 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 DCAF12L1Q5VU92 463 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 SCARA3Q6AZY7 606 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 ADALQ6DHV7 355 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 GRAMD4Q6IC98 578 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 SDE2Q6IQ49 451 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 SHISA2Q6UWI4 295 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms