RNA–Protein interactions for RNA: ENST00000550190.1

CACNB3-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 424 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-215ENST00000550190 PRAMEF12O95522 483 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 OLFM2O95897 454 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 APOEP02649 317 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 LAMP2P13473 410 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 IL9P15248 144 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 GJC1P36383 396 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 VIPR2P41587 438 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 KPNA1P52294 538 aaPredicted RBP9.36□□□□□ -0.91
CACNB3-215ENST00000550190 HADHBP55084 474 aaKnown RBP9.36□□□□□ -0.91
CACNB3-215ENST00000550190 HDAC4P56524 1084 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 HADHQ16836 314 aaKnown RBP9.36□□□□□ -0.91
CACNB3-215ENST00000550190 PUS10Q3MIT2 529 aaKnown RBP9.36□□□□□ -0.91
CACNB3-215ENST00000550190 ZFYVE27Q5T4F4 411 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 OTUD1Q5VV17 481 aaPredicted RBP9.36□□□□□ -0.91
CACNB3-215ENST00000550190 FAM131BQ86XD5 332 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 CELF5Q8N6W0 485 aaKnown RBP9.36□□□□□ -0.91
CACNB3-215ENST00000550190 ATP6V0D2Q8N8Y2 350 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 TDRD5Q8NAT2 981 aaKnown RBP9.36□□□□□ -0.91
CACNB3-215ENST00000550190 SH3RF2Q8TEC5 729 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 FNIP1Q8TF40 1166 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 CENPIQ92674 756 aaPredicted RBP9.36□□□□□ -0.91
CACNB3-215ENST00000550190 SMARCD2Q92925 531 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 USP13Q92995 863 aaPredicted RBP9.36□□□□□ -0.91
CACNB3-215ENST00000550190 NT5C3BQ969T7 300 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 WBP2Q969T9 261 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 PLD4Q96BZ4 506 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 PHF7Q9BWX1 381 aaPredicted RBP9.36□□□□□ -0.91
CACNB3-215ENST00000550190 ADAM33Q9BZ11 813 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 ZWILCHQ9H900 591 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 ZFP14Q9HCL3 533 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 PIGVQ9NUD9 493 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.36□□□□□ -0.91
CACNB3-215ENST00000550190 GDE1Q9NZC3 331 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 CALCOCO1Q9P1Z2 691 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 CFAP97Q9P2B7 532 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 THEGQ9P2T0 379 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 SLC12A6Q9UHW9 1150 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 LCMT1Q9UIC8 334 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 ARHGAP26Q9UNA1 814 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 CCL26Q9Y258 94 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 TLR6Q9Y2C9 796 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 NR2E1Q9Y466 385 aa9.36□□□□□ -0.91
CACNB3-215ENST00000550190 GRID2IPA4D2P6 1211 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 GOLGA6L9A6NEM1 432 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 HEPACAM2A8MVW5 462 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 C2CD4DB7Z1M9 353 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 SPOPO43791 374 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 PRPSAP2O60256 369 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 LRCH4O75427 683 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 PALMO75781 387 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 STC2O76061 302 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 ENDOD1O94919 500 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 IGLV3-25P01717 112 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 COMTP21964 271 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 MIPP30301 263 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 CORO1AP31146 461 aaKnown RBP9.35□□□□□ -0.91
CACNB3-215ENST00000550190 CCR1P32246 355 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 HARS2P49590 506 aaKnown RBP9.35□□□□□ -0.91
CACNB3-215ENST00000550190 CXCR3P49682 368 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 TAS2R40P59535 323 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 ZXDBP98169 803 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 ACAP1Q15027 740 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 SMAD2Q15796 467 aaKnown RBP9.35□□□□□ -0.91
CACNB3-215ENST00000550190 ARL13BQ3SXY8 428 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 TANGO2Q6ICL3 276 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 DDX42Q86XP3 938 aaKnown RBP eCLIP9.35□□□□□ -0.91
CACNB3-215ENST00000550190 DENND1CQ8IV53 801 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 UNC45BQ8IWX7 931 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 YAF2Q8IY57 180 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 RNF10Q8N5U6 811 aaKnown RBP9.35□□□□□ -0.91
CACNB3-215ENST00000550190 ARFGAP1Q8N6T3 406 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 CCDC185Q8N715 623 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 PGAP3Q96FM1 320 aaPredicted RBP9.35□□□□□ -0.91
CACNB3-215ENST00000550190 ZFRQ96KR1 1074 aaKnown RBP9.35□□□□□ -0.91
CACNB3-215ENST00000550190 CALR3Q96L12 384 aaKnown RBP9.35□□□□□ -0.91
CACNB3-215ENST00000550190 FCRL2Q96LA5 508 aaPredicted RBP9.35□□□□□ -0.91
CACNB3-215ENST00000550190 ASB16Q96NS5 453 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 NCAPGQ9BPX3 1015 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 KXD1Q9BQD3 176 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 IRX2Q9BZI1 471 aaPredicted RBP9.35□□□□□ -0.91
CACNB3-215ENST00000550190 DCLK3Q9C098 648 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 TKTL2Q9H0I9 626 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 SIK2Q9H0K1 926 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 KIF9Q9HAQ2 790 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 TMPRSS4Q9NRS4 437 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 GPATCH2LQ9NWQ4 482 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 KIF26AQ9ULI4 1882 aaPredicted RBP9.35□□□□□ -0.91
CACNB3-215ENST00000550190 USP18Q9UMW8 372 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 ALG6Q9Y672 507 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 CAPN6Q9Y6Q1 641 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 ZFP37Q9Y6Q3 630 aaPredicted RBP9.35□□□□□ -0.91
CACNB3-215ENST00000550190 LAMA2P24043 3122 aaKnown RBP9.35□□□□□ -0.91
CACNB3-215ENST00000550190 MYOFQ9NZM1 2061 aa9.35□□□□□ -0.91
CACNB3-215ENST00000550190 TRANK1O15050 2925 aa9.34□□□□□ -0.91
CACNB3-215ENST00000550190 GOLGA6L7A0A1B0GV03 622 aa9.34□□□□□ -0.91
CACNB3-215ENST00000550190 KIF5CO60282 957 aa9.34□□□□□ -0.91
CACNB3-215ENST00000550190 PAGE1O75459 146 aa9.34□□□□□ -0.91
CACNB3-215ENST00000550190 FTCDO95954 541 aa9.34□□□□□ -0.91
CACNB3-215ENST00000550190 SLC2A3P11169 496 aa9.34□□□□□ -0.91
CACNB3-215ENST00000550190 TCF4P15884 667 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms