RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	GTF2F1	P35269	517 aa	Known RBP eCLIP	12.07	□□□□□ -0.48	2e-9	■■■■■ 41.8
CNOT2-223	ENST00000550160	PAFAH1B1	P43034	410 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	PGF	P49763	221 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	PEX5	P50542	639 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	ZNF135	P52742	658 aa	Predicted RBP	12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	COPS2	P61201	443 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	CYP4F8	P98187	520 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	RING1	Q06587	406 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	CKAP4	Q07065	602 aa	Known RBP	12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	PDK2	Q15119	407 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	SMTNL2	Q2TAL5	461 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	RARS2	Q5T160	578 aa	Known RBP	12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	OTUD1	Q5VV17	481 aa	Predicted RBP	12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	ANKRD54	Q6NXT1	300 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	TMC5	Q6UXY8	1006 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	GAREM2	Q75VX8	874 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	GRASP	Q7Z6J2	395 aa	Predicted RBP	12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	TMEM150A	Q86TG1	271 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	CPNE8	Q86YQ8	564 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	UNC45B	Q8IWX7	931 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	ARFGAP1	Q8N6T3	406 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	KCTD6	Q8NC69	237 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	VN1R2	Q8NFZ6	395 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	HSPH1	Q92598	858 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	ALG3	Q92685	438 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	PLD4	Q96BZ4	506 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	ZNF707	Q96C28	371 aa	Predicted RBP	12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	NAP1L3	Q99457	506 aa	Predicted RBP	12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	SNRNP25	Q9BV90	132 aa	Known RBP	12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	SLITRK6	Q9H5Y7	841 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	WDR6	Q9NNW5	1121 aa	Known RBP	12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	HCFC1R1	Q9NWW0	138 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	DNMT3B	Q9UBC3	853 aa	Known RBP	12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	AP4E1	Q9UPM8	1137 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	MTCH2	Q9Y6C9	303 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	GREB1	Q4ZG55	1949 aa		12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	MTCL1	Q9Y4B5	1905 aa	Known RBP	12.07	□□□□□ -0.48
CNOT2-223	ENST00000550160	C2orf78	A6NCI8	922 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	CEP104	O60308	925 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	GLP2R	O95838	553 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	TBX18	O95935	607 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	CKM	P06732	381 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	RARA	P10276	462 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	TCF4	P15884	667 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	HDC	P19113	662 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	IL1R2	P27930	398 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	CXCR5	P32302	372 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	ADRA1B	P35368	520 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	AVPR1A	P37288	418 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	ARL4A	P40617	200 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	MARCKSL1	P49006	195 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	HARS2	P49590	506 aa	Known RBP	12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	CLCN6	P51797	869 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	CDH6	P55285	790 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	RBM10	P98175	930 aa	Known RBP	12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	AMPD2	Q01433	879 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	ITIH3	Q06033	890 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	SCAP	Q12770	1279 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	ADAM15	Q13444	863 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	KCNT1	Q5JUK3	1230 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	GPR158	Q5T848	1215 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	TXNDC8	Q6A555	127 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	CES5A	Q6NT32	575 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	GPR153	Q6NV75	609 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	EP400NL	Q6ZTU2	488 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	DDX42	Q86XP3	938 aa	Known RBP eCLIP	12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	SHKBP1	Q8TBC3	707 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	MAIP1	Q8WWC4	291 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	BTN2A3P	Q96KV6	586 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	PEBP4	Q96S96	227 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	CALN1	Q9BXU9	219 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	TKTL2	Q9H0I9	626 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	DHX35	Q9H5Z1	703 aa	Known RBP	12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	TASP1	Q9H6P5	420 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	CDC23	Q9UJX2	597 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	FZD10	Q9ULW2	581 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	MRPS23	Q9Y3D9	190 aa	Known RBP	12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	MYO7A	Q13402	2215 aa		12.06	□□□□□ -0.48
CNOT2-223	ENST00000550160	ZNF638	Q14966	1978 aa	Known RBP	12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160		H3BRJ5	948 aa		12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	PGRMC1	O00264	195 aa	Known RBP	12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	SOX1	O00570	391 aa	Predicted RBP	12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	FANCG	O15287	622 aa		12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	OLFM2	O95897	454 aa		12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	KDELR1	P24390	212 aa		12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	SLC11A2	P49281	568 aa		12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	ATXN1	P54253	815 aa	Known RBP	12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	EIF4EBP2	Q13542	120 aa	Predicted RBP	12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	DPYSL2	Q16555	572 aa		12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	WHAMMP3	Q1A5X7	153 aa		12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	RAB6C	Q53S08	254 aa		12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	ZC3H12A	Q5D1E8	599 aa	Known RBP	12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	TFDP3	Q5H9I0	405 aa		12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	GPR149	Q86SP6	731 aa		12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	VSIG1	Q86XK7	387 aa		12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	MICALL1	Q8N3F8	863 aa		12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	CCDC185	Q8N715	623 aa		12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	C12orf76	Q8N812	135 aa	Predicted RBP	12.05	□□□□□ -0.48
CNOT2-223	ENST00000550160	ARL14EP	Q8N8R7	260 aa	Predicted RBP	12.05	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms