RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 SLC6A4P31645 630 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 GOLGA8FQ08AF8 430 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 GOLGA8DPQ0D2H9 430 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 CRY1Q16526 586 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 GEN1Q17RS7 908 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 C10orf76Q5T2E6 689 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 TMEM215Q68D42 235 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 NADSYN1Q6IA69 706 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 GRAMD4Q6IC98 578 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 FAM114A1Q8IWE2 563 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 CAMKK1Q8N5S9 505 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 MDGA1Q8NFP4 955 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 STK32AQ8WU08 396 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 RNF139Q8WU17 664 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 ADAM33Q9BZ11 813 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 TPSD1Q9BZJ3 242 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 GANQ9H2C0 597 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 EBF1Q9UH73 591 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 XPO7Q9UIA9 1087 aaKnown RBP12.32□□□□□ -0.44
LETMD1-221ENST00000550100 STRIP2Q9ULQ0 834 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 STARD13Q9Y3M8 1113 aa12.32□□□□□ -0.44
LETMD1-221ENST00000550100 HBS1LQ9Y450 684 aaKnown RBP12.32□□□□□ -0.44
LETMD1-221ENST00000550100 A0A1W2PQF6 199 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.31□□□□□ -0.44
LETMD1-221ENST00000550100 FBXO21O94952 628 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 APBB3O95704 486 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 ERBB2P04626 1255 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 EEF1GP26641 437 aaKnown RBP12.31□□□□□ -0.44
LETMD1-221ENST00000550100 PDCLQ13371 301 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 FAM133BQ5BKY9 247 aaKnown RBP12.31□□□□□ -0.44
LETMD1-221ENST00000550100 CCDC183Q5T5S1 534 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 ANO7Q6IWH7 933 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 KIAA1211LQ6NV74 962 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 RFWD3Q6PCD5 774 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 RASSF3Q86WH2 238 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 CPXM2Q8N436 756 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 WFDC5Q8TCV5 224 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 DQX1Q8TE96 717 aaKnown RBP12.31□□□□□ -0.44
LETMD1-221ENST00000550100 GAB3Q8WWW8 586 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 DDX1Q92499 740 aaKnown RBP12.31□□□□□ -0.44
LETMD1-221ENST00000550100 EXOC4Q96A65 974 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 PLD4Q96BZ4 506 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 FCRL2Q96LA5 508 aaPredicted RBP12.31□□□□□ -0.44
LETMD1-221ENST00000550100 DCLK3Q9C098 648 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 OLA1Q9NTK5 396 aaKnown RBP12.31□□□□□ -0.44
LETMD1-221ENST00000550100 STOML2Q9UJZ1 356 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 PCDHGC3Q9UN70 934 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 ZNF510Q9Y2H8 683 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 SIK3Q9Y2K2 1263 aa12.31□□□□□ -0.44
LETMD1-221ENST00000550100 CCDC163A0A0D9SF12 145 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 PES1O00541 588 aaKnown RBP12.3□□□□□ -0.44
LETMD1-221ENST00000550100 MED7O43513 233 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 RPP40O75818 363 aaKnown RBP12.3□□□□□ -0.44
LETMD1-221ENST00000550100 NCAM1P13591 858 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 UCHL3P15374 230 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 ZNF18P17022 549 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 BCKDHBP21953 392 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 HOXD9P28356 352 aaPredicted RBP12.3□□□□□ -0.44
LETMD1-221ENST00000550100 DGKGP49619 791 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 SPEM2Q0P670 501 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 EIF4EBP2Q13542 120 aaPredicted RBP12.3□□□□□ -0.44
LETMD1-221ENST00000550100 RAPGEF1Q13905 1077 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 CCDC6Q16204 474 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 MEA1Q16626 185 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 TAC4Q86UU9 113 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 ZNF513Q8N8E2 541 aaPredicted RBP12.3□□□□□ -0.44
LETMD1-221ENST00000550100 C1orf131Q8NDD1 294 aaKnown RBP12.3□□□□□ -0.44
LETMD1-221ENST00000550100 TSTD1Q8NFU3 115 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 RLN3Q8WXF3 142 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 SORCS1Q8WY21 1168 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 ACDQ96AP0 544 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 SLC39A13Q96H72 371 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 XPO6Q96QU8 1125 aaKnown RBP12.3□□□□□ -0.44
LETMD1-221ENST00000550100 DUSP15Q9H1R2 295 aaPredicted RBP12.3□□□□□ -0.44
LETMD1-221ENST00000550100 SLC6A17Q9H1V8 727 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 LHX5Q9H2C1 402 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 CALCOCO1Q9P1Z2 691 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 NCDNQ9UBB6 729 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 RAD54BQ9Y620 910 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 RALGAPA1Q6GYQ0 2036 aa12.3□□□□□ -0.44
LETMD1-221ENST00000550100 SPTBN2O15020 2390 aa12.29□□□□□ -0.44
LETMD1-221ENST00000550100 GRAP2O75791 330 aa12.29□□□□□ -0.44
LETMD1-221ENST00000550100 IGLV3-25P01717 112 aa12.29□□□□□ -0.44
LETMD1-221ENST00000550100 ATP1A3P13637 1013 aa12.29□□□□□ -0.44
LETMD1-221ENST00000550100 CHRNB2P17787 502 aa12.29□□□□□ -0.44
LETMD1-221ENST00000550100 CNR2P34972 360 aa12.29□□□□□ -0.44
LETMD1-221ENST00000550100 CHKAP35790 457 aa12.29□□□□□ -0.44
LETMD1-221ENST00000550100 ACADSBP45954 432 aa12.29□□□□□ -0.44
LETMD1-221ENST00000550100 DGKEP52429 567 aa12.29□□□□□ -0.44
LETMD1-221ENST00000550100 COPB1P53618 953 aaKnown RBP12.29□□□□□ -0.44
LETMD1-221ENST00000550100 TBX4P57082 545 aa12.29□□□□□ -0.44
LETMD1-221ENST00000550100 PTK2Q05397 1052 aa12.29□□□□□ -0.44
LETMD1-221ENST00000550100 TYRO3Q06418 890 aa12.29□□□□□ -0.44
LETMD1-221ENST00000550100 STX1AQ16623 288 aa12.29□□□□□ -0.44
LETMD1-221ENST00000550100 PTPN20Q4JDL3 420 aa12.29□□□□□ -0.44
LETMD1-221ENST00000550100 C2CD6Q53TS8 623 aa12.29□□□□□ -0.44
LETMD1-221ENST00000550100 ADGRF1Q5T601 910 aa12.29□□□□□ -0.44
LETMD1-221ENST00000550100 TAF3Q5VWG9 929 aa12.29□□□□□ -0.44
LETMD1-221ENST00000550100 LAIR1Q6GTX8 287 aa12.29□□□□□ -0.44
LETMD1-221ENST00000550100 SASS6Q6UVJ0 657 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms