RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 TICAM2Q86XR7 235 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 SRRM1Q8IYB3 904 aaKnown RBP4.74□□□□□ -1.65
SNRPF-202ENST00000549580 IZUMO1Q8IYV9 350 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 SLC44A3Q8N4M1 653 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 OSCP1Q8WVF1 389 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 ATG4AQ8WYN0 398 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 HTRA1Q92743 480 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 TMEM125Q96AQ2 219 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 FAM136AQ96C01 138 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 PAAF1Q9BRP4 392 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 C17orf80Q9BSJ5 609 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 VN1R3Q9BXE9 311 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 ELAC1Q9H777 363 aaKnown RBP4.74□□□□□ -1.65
SNRPF-202ENST00000549580 TRIM36Q9NQ86 728 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 RXFP3Q9NSD7 469 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 NDUFAF4Q9P032 175 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 FAM90A20PA6NIJ5 464 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 LRRC3CA6NJW4 275 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 B4E171 279 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 MGST3O14880 152 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 SPDEFO95238 335 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 CER1O95813 267 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 TFRCP02786 760 aaKnown RBP4.73□□□□□ -1.65
SNRPF-202ENST00000549580 TSPAN7P41732 249 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 NR1H2P55055 460 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 SP2Q02086 613 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 SLC12A1Q13621 1099 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 CSHL1Q14406 222 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 PREPLQ4J6C6 727 aaPredicted RBP4.73□□□□□ -1.65
SNRPF-202ENST00000549580 FAAH2Q6GMR7 532 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 ARMC6Q6NXE6 501 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 MSANTD2Q6P1R3 559 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 CLEC9AQ6UXN8 241 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 PIK3AP1Q6ZUJ8 805 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 C1QL2Q7Z5L3 287 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 ARHGEF25Q86VW2 580 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 HEATR4Q86WZ0 1026 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 LRRC71Q8N4P6 559 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 TMEM57Q8N5G2 664 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 METTL25Q8N6Q8 603 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 ZNF366Q8N895 744 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 CPT1BQ92523 772 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 NELL1Q92832 810 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 C3orf49Q96BT1 292 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 HAPLN3Q96S86 360 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 ABHD16BQ9H3Z7 469 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 UNKLQ9H9P5 680 aaKnown RBP4.73□□□□□ -1.65
SNRPF-202ENST00000549580 JMJD4Q9H9V9 463 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 GALNT9Q9HCQ5 603 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 INTS13Q9NVM9 706 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 TLK1Q9UKI8 766 aa4.73□□□□□ -1.65
SNRPF-202ENST00000549580 CCDC196A0A1B0GTZ2 297 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 C1QL1O75973 258 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 LARGE1O95461 756 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 RXRAP19793 462 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 CAPN3P20807 821 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 BMPR1AP36894 532 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 DLGAP5Q15398 846 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 LY6KQ17RY6 165 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 GALNTL6Q49A17 601 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 DEPDC1Q5TB30 811 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 FAM180BQ6P0A1 224 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 TBC1D1Q86TI0 1168 aaPredicted RBP4.72□□□□□ -1.65
SNRPF-202ENST00000549580 TSPYL6Q8N831 410 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 USP38Q8NB14 1042 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 ATRIPQ8WXE1 791 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 RNF31Q96EP0 1072 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 ZNF778Q96MU6 729 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 ALOXE3Q9BYJ1 711 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 BRD8Q9H0E9 1235 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 OSBPL5Q9H0X9 879 aaPredicted RBP4.72□□□□□ -1.65
SNRPF-202ENST00000549580 CHODLQ9H9P2 273 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 DRG1Q9Y295 367 aaKnown RBP4.72□□□□□ -1.65
SNRPF-202ENST00000549580 DERAQ9Y315 318 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 NOX1Q9Y5S8 564 aa4.72□□□□□ -1.65
SNRPF-202ENST00000549580 KIF28PB7ZC32 967 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 PPM1DO15297 605 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 CTIFO43310 598 aaKnown RBP4.71□□□□□ -1.66
SNRPF-202ENST00000549580 BAIAP3O94812 1187 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 WDR47O94967 919 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 ESRRBO95718 433 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 CYP21A2P08686 494 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 EGR2P11161 476 aaPredicted RBP4.71□□□□□ -1.66
SNRPF-202ENST00000549580 ATP1A3P13637 1013 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 CD19P15391 556 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 HOXB6P17509 224 aaKnown RBP4.71□□□□□ -1.66
SNRPF-202ENST00000549580 DDX6P26196 483 aaKnown RBP eCLIP4.71□□□□□ -1.66
SNRPF-202ENST00000549580 SERPINA4P29622 427 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 KRT9P35527 623 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 PBX1P40424 430 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 HNRNPMP52272 730 aaKnown RBP eCLIP4.71□□□□□ -1.66
SNRPF-202ENST00000549580 SF3A3Q12874 501 aaKnown RBP eCLIP4.71□□□□□ -1.66
SNRPF-202ENST00000549580 RESTQ13127 1097 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 TBRG1Q3YBR2 411 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 SPDYE7PQ495Y7 208 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 TMEM196Q5HYL7 178 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 FAM90A2PQ658T7 463 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 SLC9A4Q6AI14 798 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 KRTAP5-1Q6L8H4 278 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 MZT2BQ6NZ67 158 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms