RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 TKTL1P51854 596 aa10.34□□□□□ -0.75
RAB5B-206ENST00000549505 ATP11AP98196 1134 aa10.34□□□□□ -0.75
RAB5B-206ENST00000549505 SLC18A2Q05940 514 aa10.34□□□□□ -0.75
RAB5B-206ENST00000549505 PDIA2Q13087 525 aaKnown RBP10.34□□□□□ -0.75
RAB5B-206ENST00000549505 LLGL1Q15334 1064 aa10.34□□□□□ -0.75
RAB5B-206ENST00000549505 MANEALQ5VSG8 457 aa10.34□□□□□ -0.75
RAB5B-206ENST00000549505 SLC24A5Q71RS6 500 aa10.34□□□□□ -0.75
RAB5B-206ENST00000549505 CCNJLQ8IV13 435 aa10.34□□□□□ -0.75
RAB5B-206ENST00000549505 COLGALT2Q8IYK4 626 aa10.34□□□□□ -0.75
RAB5B-206ENST00000549505 MAGEB18Q96M61 343 aa10.34□□□□□ -0.75
RAB5B-206ENST00000549505 TSGA13Q96PP4 275 aa10.34□□□□□ -0.75
RAB5B-206ENST00000549505 KLC2Q9H0B6 622 aa10.34□□□□□ -0.75
RAB5B-206ENST00000549505 XAB2Q9HCS7 855 aaKnown RBP10.34□□□□□ -0.75
RAB5B-206ENST00000549505 NGRNQ9NPE2 291 aaKnown RBP10.34□□□□□ -0.75
RAB5B-206ENST00000549505 KRT82Q9NSB4 513 aa10.34□□□□□ -0.75
RAB5B-206ENST00000549505 A0A0A0MRY4 1105 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 MYBPHLA2RUH7 354 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 WASH4PA8MWX3 477 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 NRP1O14786 923 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 ASMTLO95671 621 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 ZBED1O96006 694 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 HPDP32754 393 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-206ENST00000549505 GTF2A1P52655 376 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-206ENST00000549505 MBTPS1Q14703 1052 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 FASTKD3Q14CZ7 662 aaKnown RBP10.33□□□□□ -0.76
RAB5B-206ENST00000549505 ACBD5Q5T8D3 534 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-206ENST00000549505 AFMIDQ63HM1 303 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 MSANTD2Q6P1R3 559 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 CCDC25Q86WR0 208 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 METTL23Q86XA0 190 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 ZSCAN18Q8TBC5 510 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-206ENST00000549505 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-206ENST00000549505 RNF139Q8WU17 664 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 SLC44A1Q8WWI5 657 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 SPATA13Q96N96 652 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 HAPLN3Q96S86 360 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 NDUFAB1O14561 156 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 SYN3O14994 580 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 TRIM66O15016 1216 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 MTSS1O43312 755 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 TBC1D4O60343 1298 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 GRAP2O75791 330 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 LTFP02788 710 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 RBL1P28749 1068 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 MPP2Q14168 576 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 BRMS1LQ5PSV4 323 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 TIFABQ6ZNK6 161 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 PPP1R13LQ8WUF5 828 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 C8orf48Q96LL4 319 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 C9orf72Q96LT7 481 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 LRRC4Q9HBW1 653 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 DMAP1Q9NPF5 467 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-206ENST00000549505 PIGVQ9NUD9 493 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 INTS9Q9NV88 658 aaKnown RBP10.33□□□□□ -0.76
RAB5B-206ENST00000549505 AP1G2O75843 785 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 STX2P32856 288 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 CCNFP41002 786 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 DYNLT1P63172 113 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 PPIDQ08752 370 aaKnown RBP10.33□□□□□ -0.76
RAB5B-206ENST00000549505 PDK1Q15118 436 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 KCTD19Q17RG1 926 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-206ENST00000549505 SPDYAQ5MJ70 313 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 DSTYKQ6XUX3 929 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 ARHGEF18Q6ZSZ5 1173 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 CCDC117Q8IWD4 279 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-206ENST00000549505 ZBED8Q8IZ13 594 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 SIX6OS1Q8N1H7 587 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 RNF169Q8NCN4 708 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 TFB1MQ8WVM0 346 aaKnown RBP10.33□□□□□ -0.76
RAB5B-206ENST00000549505 MYLPFQ96A32 169 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 GRAMD1AQ96CP6 724 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 HDAC11Q96DB2 347 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 SIGLEC10Q96LC7 697 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 ADAM2Q99965 735 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 ULBP1Q9BZM6 244 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 RETREG1Q9H6L5 497 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 PRKAG3Q9UGI9 489 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 TTLL3Q9Y4R7 772 aa10.33□□□□□ -0.76
RAB5B-206ENST00000549505 TMEM120BA0PK00 339 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 CLDN5O00501 218 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 DHRS4L1P0CG22 281 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 ARL4AP40617 200 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 CACNA2D1P54289 1103 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 GALNT2Q10471 571 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 SMARCB1Q12824 385 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 DBN1Q16643 649 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 STXBP5Q5T5C0 1151 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 SYPL2Q5VXT5 272 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 LRRC8BQ6P9F7 803 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 RFX8Q6ZV50 586 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 GPRIN1Q7Z2K8 1008 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 FBXO36Q8NEA4 188 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 PYROXD1Q8WU10 500 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 LPPQ93052 612 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 CYTH2Q99418 400 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 VAT1Q99536 393 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 KDM4CQ9H3R0 1056 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 TMEM161AQ9NX61 479 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 MOCS1Q9NZB8 636 aa10.32□□□□□ -0.76
RAB5B-206ENST00000549505 BCCIPQ9P287 314 aaKnown RBP eCLIP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms