RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 PDCD2Q16342 344 aaPredicted RBP4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 P3H1Q32P28 736 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 ZKSCAN2Q63HK3 967 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 MSANTD2Q6P1R3 559 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 ACSM6Q6P461 480 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 GGT6Q6P531 493 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 VPS37AQ8NEZ2 397 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 OR52L2PQ8NGH6 319 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 ZNF398Q8TD17 642 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 GLMPQ8WWB7 406 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 PRR11Q96HE9 360 aaPredicted RBP4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 KATNAL1Q9BW62 490 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 EPS8L2Q9H6S3 715 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 KCNK9Q9NPC2 374 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 FSCN3Q9NQT6 498 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 FBXO28Q9NVF7 368 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 UBE2J1Q9Y385 318 aaPredicted RBP4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 ARHGEF17Q96PE2 2063 aaPredicted RBP4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 WIPF3A6NGB9 483 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 AQP12BA6NM10 295 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 FYB1O15117 783 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 ASNA1O43681 348 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 MBPP02686 304 aaPredicted RBP4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 CSTBP04080 98 aaKnown RBP4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 TUBB4AP04350 444 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 ITGA2BP08514 1039 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 CYP2A6P11509 494 aaPredicted RBP4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 KRTAP10-11P60412 298 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 WDR5P61964 334 aaKnown RBP4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 GALNT1Q10472 559 aaPredicted RBP4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 FOXF2Q12947 444 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 CBFBQ13951 182 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 GRM4Q14833 912 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 TMEM119Q4V9L6 283 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 C10orf62Q5T681 223 aaPredicted RBP4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 ATPAF1Q5TC12 328 aaPredicted RBP4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 RINT1Q6NUQ1 792 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 RANBP10Q6VN20 620 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 ZNF813Q6ZN06 617 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 RINLQ6ZS11 566 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 KRT27Q7Z3Y8 459 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 TRABD2AQ86V40 505 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 C16orf71Q8IYS4 520 aaPredicted RBP4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 C8orf58Q8NAV2 365 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 NTN5Q8WTR8 489 aaPredicted RBP4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 STYXQ8WUJ0 223 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 DPF1Q92782 380 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 FAR2Q96K12 515 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 RMDN3Q96TC7 470 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 ADARB2Q9NS39 739 aaKnown RBP4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 ABHD10Q9NUJ1 306 aa4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 HERC5Q9UII4 1024 aaKnown RBP4.79□□□□□ -1.64
DEPDC4-205ENST00000548313 CCDC187A0A096LP49 1063 aa4.78□□□□□ -1.64
DEPDC4-205ENST00000548313 hCG_1642624A0A1W2PR95 340 aa4.78□□□□□ -1.64
DEPDC4-205ENST00000548313 DNPH1O43598 174 aa4.78□□□□□ -1.64
DEPDC4-205ENST00000548313 CDK7P50613 346 aa4.78□□□□□ -1.64
DEPDC4-205ENST00000548313 C21orf58P58505 322 aa4.78□□□□□ -1.64
DEPDC4-205ENST00000548313 RAE1P78406 368 aaKnown RBP4.78□□□□□ -1.64
DEPDC4-205ENST00000548313 ELF2Q15723 593 aa4.78□□□□□ -1.64
DEPDC4-205ENST00000548313 CNGA3Q16281 694 aa4.78□□□□□ -1.64
DEPDC4-205ENST00000548313 PFKFB3Q16875 520 aaPredicted RBP4.78□□□□□ -1.64
DEPDC4-205ENST00000548313 TRIM60Q495X7 471 aa4.78□□□□□ -1.64
DEPDC4-205ENST00000548313 CCDC38Q502W7 563 aa4.78□□□□□ -1.64
DEPDC4-205ENST00000548313 ZNF782Q6ZMW2 699 aaPredicted RBP4.78□□□□□ -1.64
DEPDC4-205ENST00000548313 PNISRQ8TF01 805 aaKnown RBP4.78□□□□□ -1.64
DEPDC4-205ENST00000548313 LTV1Q96GA3 475 aaPredicted RBP4.78□□□□□ -1.64
DEPDC4-205ENST00000548313 DACT1Q9NYF0 836 aa4.78□□□□□ -1.64
DEPDC4-205ENST00000548313 SIRT4Q9Y6E7 314 aaPredicted RBP4.78□□□□□ -1.64
DEPDC4-205ENST00000548313 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.77□□□□□ -1.65
DEPDC4-205ENST00000548313 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.77□□□□□ -1.65
DEPDC4-205ENST00000548313 RNF8O76064 485 aa4.77□□□□□ -1.65
DEPDC4-205ENST00000548313 LARGE1O95461 756 aa4.77□□□□□ -1.65
DEPDC4-205ENST00000548313 CER1O95813 267 aa4.77□□□□□ -1.65
DEPDC4-205ENST00000548313 SLC3A2P08195 630 aaKnown RBP4.77□□□□□ -1.65
DEPDC4-205ENST00000548313 FAM83BQ5T0W9 1011 aa4.77□□□□□ -1.65
DEPDC4-205ENST00000548313 TANGO2Q6ICL3 276 aa4.77□□□□□ -1.65
DEPDC4-205ENST00000548313 CACNA2D3Q8IZS8 1091 aa4.77□□□□□ -1.65
DEPDC4-205ENST00000548313 GALNT16Q8N428 558 aa4.77□□□□□ -1.65
DEPDC4-205ENST00000548313 ATG16L2Q8NAA4 619 aa4.77□□□□□ -1.65
DEPDC4-205ENST00000548313 SLC22A17Q8WUG5 538 aa4.77□□□□□ -1.65
DEPDC4-205ENST00000548313 P2RY11Q96G91 374 aa4.77□□□□□ -1.65
DEPDC4-205ENST00000548313 ARPC5LQ9BPX5 153 aa4.77□□□□□ -1.65
DEPDC4-205ENST00000548313 CDCP1Q9H5V8 836 aa4.77□□□□□ -1.65
DEPDC4-205ENST00000548313 SCAF8Q9UPN6 1271 aaKnown RBP4.77□□□□□ -1.65
DEPDC4-205ENST00000548313 PCDHB2Q9Y5E7 798 aa4.77□□□□□ -1.65
DEPDC4-205ENST00000548313 LOC105369274A0A096LPK9 316 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 LOC102723532A0A0G2JNH3 316 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 EFCAB8A8MWE9 144 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 M0QZQ0 153 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 PPP6CO00743 305 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 FCHO1O14526 889 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 NKX2-8O15522 239 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 USP12O75317 370 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 TNFRSF6BO95407 300 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 CYP2D6P10635 497 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 ALADP13716 330 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 KLRK1P26718 216 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 HOXD12P35452 270 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 SLC14A1Q13336 389 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 TRIM14Q14142 442 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms