RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 KIF11P52732 1056 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 MFAP3P55082 362 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 ARID5AQ03989 594 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 SLC14A1Q13336 389 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 PKP1Q13835 747 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 ACAP1Q15027 740 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 COL28A1Q2UY09 1125 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 C1orf220Q5T0J3 134 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 FYB2Q5VWT5 728 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 RESP18Q5W5W9 173 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 ZNF366Q8N895 744 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 TMC2Q8TDI7 906 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 TAS1R2Q8TE23 839 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 DDI1Q8WTU0 396 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 ADAMTS14Q8WXS8 1223 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 PRCCQ92733 491 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 TAF4BQ92750 862 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 PAGE5Q96GU1 130 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 THAP10Q9P2Z0 257 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 FBXO10Q9UK96 956 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 AGO1Q9UL18 857 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 PCDHA5Q9Y5H7 936 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 DOCK9Q9BZ29 2069 aa12.55□□□□□ -0.4
TRAFD1-205ENST00000548277 URB1O60287 2271 aaKnown RBP12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 A0A1B0GVT2 93 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 FAM221BA6H8Z2 402 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 METTL12A8MUP2 240 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 PDXKO00764 312 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 BCAT2O15382 392 aaPredicted RBP12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 CALUO43852 315 aaPredicted RBP12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 CYBBP04839 570 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 PRKCHP24723 683 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 CHKAP35790 457 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 CSNK1EP49674 416 aaKnown RBP12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 COG7P83436 770 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 PPP3CAQ08209 521 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 HLA-BQ31612 363 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 RSRC2Q7L4I2 434 aaKnown RBP12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 SLC9A9Q8IVB4 645 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 RHBDD1Q8TEB9 315 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 DNASE2BQ8WZ79 361 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 DUSP16Q9BY84 665 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 IMPG2Q9BZV3 1241 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 CCDC86Q9H6F5 360 aaKnown RBP12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 TM7SF3Q9NS93 570 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 ELOVL2Q9NXB9 296 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 USP36Q9P275 1121 aaKnown RBP12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 PCOLCE2Q9UKZ9 415 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 APOBEC2Q9Y235 224 aaKnown RBP12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 ZNF510Q9Y2H8 683 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 SLCO1B1Q9Y6L6 691 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 PLXNA2O75051 1894 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 MYLKQ15746 1914 aa12.54□□□□□ -0.4
TRAFD1-205ENST00000548277 A0A1B0GVL5 298 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 IKBKBO14920 756 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 ACTN4O43707 911 aaKnown RBP12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 CILPO75339 1184 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 PENKP01210 267 aaPredicted RBP12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 CAPNS1P04632 268 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 SLFN14P0C7P3 912 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 ATXN1LP0C7T5 689 aaKnown RBP12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 OXTRP30559 389 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 MATKP42679 507 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 COPAP53621 1224 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 BNC1Q01954 994 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 DNM1Q05193 864 aaKnown RBP12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 TMEM215Q68D42 235 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 KLHDC10Q6PID8 442 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 CCNI2Q6ZMN8 369 aaPredicted RBP12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 CCDC186Q7Z3E2 898 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 TADA2BQ86TJ2 420 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 CYB5D2Q8WUJ1 264 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 EEF2KMTQ96G04 330 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 PIWIL1Q96J94 861 aaKnown RBP12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 NUP58Q9BVL2 599 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 DCLK3Q9C098 648 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 MARCH2Q9P0N8 246 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 FNDC3AQ9Y2H6 1198 aaKnown RBP12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 SLC27A6Q9Y2P4 619 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 GPSM3Q9Y4H4 160 aa12.53□□□□□ -0.4
TRAFD1-205ENST00000548277 KRT13P13646 458 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 NR2F2P24468 414 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 PSEN1P49768 467 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 YWHAGP61981 247 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 INCA1Q0VD86 236 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 FNDC3BQ53EP0 1204 aaKnown RBP12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 ATL3Q6DD88 541 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 LAYNQ6UX15 382 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 SERPINA13PQ6UXR4 307 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 ANKS1BQ7Z6G8 1248 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 METTL3Q86U44 580 aaKnown RBP12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 PDZD3Q86UT5 571 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 CCDC150Q8NCX0 1101 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 CADM4Q8NFZ8 388 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 ARID3AQ99856 593 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 ZDHHC5Q9C0B5 715 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 C6orf106Q9H6K1 298 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 CYP3A43Q9HB55 503 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 SFMBT1Q9UHJ3 866 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms