RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 RELL1Q8IUW5 271 aa13.41□□□□□ -0.26
BRF1-210ENST00000547374 ZNF669Q96BR6 464 aaPredicted RBP13.41□□□□□ -0.26
BRF1-210ENST00000547374 TUBGCP5Q96RT8 1024 aa13.41□□□□□ -0.26
BRF1-210ENST00000547374 ZNF408Q9H9D4 720 aa13.41□□□□□ -0.26
BRF1-210ENST00000547374 ELP3Q9H9T3 547 aa13.41□□□□□ -0.26
BRF1-210ENST00000547374 DNAJC6O75061 913 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 WFS1O76024 890 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 MXD4Q14582 209 aaPredicted RBP13.4□□□□□ -0.26
BRF1-210ENST00000547374 TRNP1Q6NT89 227 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 PPP1R2P3Q6NXS1 205 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 PTCD3Q96EY7 689 aaKnown RBP13.4□□□□□ -0.26
BRF1-210ENST00000547374 EBF3Q9H4W6 596 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 PCDH18Q9HCL0 1135 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 WDR35Q9P2L0 1181 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 IQCF3P0C7M6 154 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 NELFEP18615 380 aaKnown RBP13.4□□□□□ -0.26
BRF1-210ENST00000547374 AKAP5P24588 427 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 ACAT1P24752 427 aaKnown RBP13.4□□□□□ -0.26
BRF1-210ENST00000547374 ZNF143P52747 638 aaPredicted RBP13.4□□□□□ -0.26
BRF1-210ENST00000547374 MRPS5P82675 430 aaKnown RBP13.4□□□□□ -0.26
BRF1-210ENST00000547374 DPY19L2Q6NUT2 758 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 IYDQ6PHW0 289 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 ZPBP2Q6X784 338 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 TP53INP2Q8IXH6 220 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 COLGALT1Q8NBJ5 622 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 RNF34Q969K3 372 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 SH3GL3Q99963 347 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 OXCT2Q9BYC2 517 aaPredicted RBP13.4□□□□□ -0.26
BRF1-210ENST00000547374 WDR55Q9H6Y2 383 aaPredicted RBP13.4□□□□□ -0.26
BRF1-210ENST00000547374 DPP3Q9NY33 737 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 PIM2Q9P1W9 311 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 SLC15A5A6NIM6 579 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 NDC80O14777 642 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 PAPSS1O43252 624 aaPredicted RBP13.4□□□□□ -0.26
BRF1-210ENST00000547374 INSRRP14616 1297 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 RTP1P59025 263 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 KCTD2Q14681 263 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 CAND1Q86VP6 1230 aaKnown RBP13.4□□□□□ -0.26
BRF1-210ENST00000547374 TRIM42Q8IWZ5 723 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 SNX31Q8N9S9 440 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 SKA1Q96BD8 255 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 MRPL45Q9BRJ2 306 aaKnown RBP13.4□□□□□ -0.26
BRF1-210ENST00000547374 CXCL16Q9H2A7 254 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 AP4E1Q9UPM8 1137 aa13.4□□□□□ -0.26
BRF1-210ENST00000547374 MAFO75444 373 aaPredicted RBP13.39□□□□□ -0.27
BRF1-210ENST00000547374 ACADSP16219 412 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 GPD2P43304 727 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 CCR10P46092 362 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 ZNF132P52740 706 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 COPAP53621 1224 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 CCDC14Q49A88 953 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 CES4AQ5XG92 561 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 CTU1Q7Z7A3 348 aaKnown RBP13.39□□□□□ -0.27
BRF1-210ENST00000547374 MED10Q9BTT4 135 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 CLIC5Q9NZA1 410 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 CACNG4Q9UBN1 327 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 APPL1Q9UKG1 709 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 MYOCOSA0A1B0GUC4 107 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 PEX1O43933 1283 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 NUDT2P50583 147 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 SURF1Q15526 300 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 IRGCQ6NXR0 463 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 CMASQ8NFW8 434 aaPredicted RBP13.39□□□□□ -0.27
BRF1-210ENST00000547374 GSDMBQ8TAX9 411 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 TMA16Q96EY4 203 aaKnown RBP13.39□□□□□ -0.27
BRF1-210ENST00000547374 DPEP3Q9H4B8 488 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 KRT82Q9NSB4 513 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 HBS1LQ9Y450 684 aaKnown RBP13.39□□□□□ -0.27
BRF1-210ENST00000547374 DOCK5Q9H7D0 1870 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 ACKR2O00590 384 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 HSP90AA5PQ58FG0 334 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 DALRD3Q5D0E6 543 aaKnown RBP13.39□□□□□ -0.27
BRF1-210ENST00000547374 FAM47CQ5HY64 1035 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 XRRA1Q6P2D8 792 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 LAYNQ6UX15 382 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 CATSPERGQ6ZRH7 1159 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 POPDC2Q9HBU9 364 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 MAP3K20Q9NYL2 800 aaKnown RBP13.39□□□□□ -0.27
BRF1-210ENST00000547374 STX18Q9P2W9 335 aaKnown RBP13.39□□□□□ -0.27
BRF1-210ENST00000547374 C10orf71Q711Q0 1435 aa13.39□□□□□ -0.27
BRF1-210ENST00000547374 MAGEA13PA6NCF6 341 aa13.38□□□□□ -0.27
BRF1-210ENST00000547374 SOWAHBA6NEL2 793 aa13.38□□□□□ -0.27
BRF1-210ENST00000547374 RAG1P15918 1043 aa13.38□□□□□ -0.27
BRF1-210ENST00000547374 PSMB4P28070 264 aa13.38□□□□□ -0.27
BRF1-210ENST00000547374 PEX2P28328 305 aa13.38□□□□□ -0.27
BRF1-210ENST00000547374 ETV4P43268 484 aa13.38□□□□□ -0.27
BRF1-210ENST00000547374 AP3M2P53677 418 aa13.38□□□□□ -0.27
BRF1-210ENST00000547374 MED21Q13503 144 aa13.38□□□□□ -0.27
BRF1-210ENST00000547374 PDCD2Q16342 344 aaPredicted RBP13.38□□□□□ -0.27
BRF1-210ENST00000547374 SPDYAQ5MJ70 313 aa13.38□□□□□ -0.27
BRF1-210ENST00000547374 ZNF354CQ86Y25 554 aa13.38□□□□□ -0.27
BRF1-210ENST00000547374 TRPM4Q8TD43 1214 aa13.38□□□□□ -0.27
BRF1-210ENST00000547374 C18orf25Q96B23 403 aaPredicted RBP13.38□□□□□ -0.27
BRF1-210ENST00000547374 GOLGA2P5Q9HBQ8 144 aa13.38□□□□□ -0.27
BRF1-210ENST00000547374 CYLDQ9NQC7 956 aa13.38□□□□□ -0.27
BRF1-210ENST00000547374 SNTG2Q9NY99 539 aa13.38□□□□□ -0.27
BRF1-210ENST00000547374 SLC39A10Q9ULF5 831 aa13.38□□□□□ -0.27
BRF1-210ENST00000547374 SOX13Q9UN79 622 aa13.38□□□□□ -0.27
BRF1-210ENST00000547374 TAF1LQ8IZX4 1826 aa13.38□□□□□ -0.27
BRF1-210ENST00000547374 RFPL1O75677 317 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms