RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 TEPSINQ96N21 525 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 COPS7BQ9H9Q2 264 aaPredicted RBP11.04□□□□□ -0.64
NPAS3-205ENST00000547068 MKS1Q9NXB0 559 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 PACSIN3Q9UKS6 424 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 RBBP6Q7Z6E9 1792 aaKnown RBP11.04□□□□□ -0.64
NPAS3-205ENST00000547068 A0A1B0GTW7 788 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 CXorf49A8MYA2 514 aaPredicted RBP11.04□□□□□ -0.64
NPAS3-205ENST00000547068 DDX39AO00148 427 aaKnown RBP11.04□□□□□ -0.64
NPAS3-205ENST00000547068 AVILO75366 819 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 PSMC3P17980 439 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 GNA15P30679 374 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 HALP42357 657 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 SPIDRQ14159 915 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 DPYSL3Q14195 570 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 FASTKD1Q53R41 847 aaKnown RBP11.04□□□□□ -0.64
NPAS3-205ENST00000547068 BRDTQ58F21 947 aaPredicted RBP11.04□□□□□ -0.64
NPAS3-205ENST00000547068 WDR44Q5JSH3 913 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 TATDN1Q6P1N9 297 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 DCUN1D2Q6PH85 259 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 SLC15A3Q8IY34 581 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 PPP4R1Q8TF05 950 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 APBB2Q92870 758 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 COX4I2Q96KJ9 171 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 SH2D3AQ9BRG2 576 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 TEKT3Q9BXF9 490 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 NUF2Q9BZD4 464 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 TSPYL2Q9H2G4 693 aaPredicted RBP11.04□□□□□ -0.64
NPAS3-205ENST00000547068 NMRK2Q9NPI5 230 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 XPNPEP1Q9NQW7 623 aa11.04□□□□□ -0.64
NPAS3-205ENST00000547068 HTR3EA5X5Y0 456 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 MATN2O00339 956 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 XPO1O14980 1071 aaKnown RBP11.03□□□□□ -0.64
NPAS3-205ENST00000547068 KRT38O76015 456 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 CFBP00751 764 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 TFPTP0C1Z6 253 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 COL6A2P12110 1019 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 CRHR1P34998 444 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 PHKA2P46019 1235 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 SLC1A6P48664 564 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 IDH3AP50213 366 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 PFKPQ01813 784 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 KCTD21Q4G0X4 260 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 PRAMEF18Q5VWM3 479 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 TMEM53Q6P2H8 277 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 LDHDQ86WU2 507 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 TICAM1Q8IUC6 712 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 NLRP7Q8WX94 980 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 MFSD14AQ96MC6 490 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 GPBP1L1Q9HC44 474 aaPredicted RBP11.03□□□□□ -0.64
NPAS3-205ENST00000547068 PNPLA8Q9NP80 782 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 SELENONQ9NZV5 590 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 SPATA7Q9P0W8 599 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 STK39Q9UEW8 545 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 RIMS3Q9UJD0 308 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 TTLL3Q9Y4R7 772 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 FBP2O00757 339 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 DCXO43602 365 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 ARP10275 920 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 MYL4P12829 197 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 COX4I1P13073 169 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 STAT2P52630 851 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 NRLP54845 237 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 OGDHQ02218 1023 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 CYP24A1Q07973 514 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 FLOT2Q14254 428 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 CEP55Q53EZ4 464 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 TEDDM1Q5T9Z0 273 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 ZFP1Q6P2D0 407 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 ELMSAN1Q6PJG2 1045 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 TMEM270Q6UE05 265 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 CDAN1Q8IWY9 1227 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 PHTF2Q8N3S3 785 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 CCDC97Q96F63 343 aaPredicted RBP11.03□□□□□ -0.64
NPAS3-205ENST00000547068 MPHOSPH6Q99547 160 aaKnown RBP11.03□□□□□ -0.64
NPAS3-205ENST00000547068 SERPINI1Q99574 410 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 FRMD8P1Q9BZ68 369 aaPredicted RBP11.03□□□□□ -0.64
NPAS3-205ENST00000547068 KLC2Q9H0B6 622 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 ST6GALNAC4Q9H4F1 302 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 TBC1D23Q9NUY8 699 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 DOLKQ9UPQ8 538 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 PCDHB4Q9Y5E5 795 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 LOXHD1Q8IVV2 1947 aa11.03□□□□□ -0.64
NPAS3-205ENST00000547068 ADM5C9JUS6 153 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 UGT1A9O60656 530 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 TOP3BO95985 862 aaKnown RBP11.02□□□□□ -0.64
NPAS3-205ENST00000547068 ZBED1O96006 694 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 C1QAP02745 245 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 RAB15P59190 212 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 PSMD6Q15008 389 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 ABCB5Q2M3G0 1257 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 SHROOM1Q2M3G4 852 aaPredicted RBP11.02□□□□□ -0.64
NPAS3-205ENST00000547068 SMTNL2Q2TAL5 461 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 ANKDD1AQ495B1 522 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 MROH9Q5TGP6 573 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 ITPRIPL1Q6GPH6 555 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 DNAJC24Q6P3W2 148 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 CCDC80Q76M96 950 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 MAVSQ7Z434 540 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 GSDMBQ8TAX9 411 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 HNRNPABQ99729 332 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms