RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 HIPK3Q9H422 1215 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 DTLQ9NZJ0 730 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 MPP6Q9NZW5 540 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 FEZ2Q9UHY8 353 aaPredicted RBP12.4□□□□□ -0.42
CCDC38-202ENST00000546386 LCMT1Q9UIC8 334 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 PCDHB7Q9Y5E2 793 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 MOXD2PA6NHM9 499 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 E7EVH7 732 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 LTFP02788 710 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 SELPP16109 830 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 AUHQ13825 339 aaKnown RBP12.4□□□□□ -0.42
CCDC38-202ENST00000546386 RTP2Q5QGT7 225 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 MAP7D3Q8IWC1 876 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 C4orf33Q8N1A6 199 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 MPP5Q8N3R9 675 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 FBXO36Q8NEA4 188 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 PGBD4Q96DM1 585 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 SMARCD1Q96GM5 515 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 BEGAINQ9BUH8 593 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 USP29Q9HBJ7 922 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 NDFIP2Q9NV92 336 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 LRFN2Q9ULH4 789 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.39□□□□□ -0.43
CCDC38-202ENST00000546386 E2F8A0AVK6 867 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 TTC24A2A3L6 582 aaPredicted RBP12.39□□□□□ -0.43
CCDC38-202ENST00000546386 ITGAVP06756 1048 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 CPB1P15086 417 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 CCT5P48643 541 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 ZSCAN26Q16670 478 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 GLIPR1L2Q4G1C9 344 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 EFHC1Q5JVL4 640 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 VARS2Q5ST30 1063 aaKnown RBP12.39□□□□□ -0.43
CCDC38-202ENST00000546386 SPOUT1Q5T280 376 aaKnown RBP12.39□□□□□ -0.43
CCDC38-202ENST00000546386 NCBP2-AS2Q69YL0 99 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 ARHGAP36Q6ZRI8 547 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 TAC4Q86UU9 113 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 COLGALT2Q8IYK4 626 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 TTC39CQ8N584 583 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 NPWQ8N729 165 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 PRCCQ92733 491 aaPredicted RBP12.39□□□□□ -0.43
CCDC38-202ENST00000546386 HSFY1Q96LI6 401 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 ETNK1Q9HBU6 452 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 ARHGEF4Q9NR80 690 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 PDCD11Q14690 1871 aaKnown RBP12.39□□□□□ -0.43
CCDC38-202ENST00000546386 VAV1P15498 845 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 PCSK1P29120 753 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 MAP2K2P36507 400 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 SLC11A1P49279 550 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 COPS2P61201 443 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 DUSP4Q13115 394 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 NOMO1Q15155 1222 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 HIF1AQ16665 826 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 MGAT5BQ3V5L5 792 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 CTXN3Q4LDR2 81 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 C3orf62Q6ZUJ4 267 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 BHLHA9Q7RTU4 235 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 PNPLA1Q8N8W4 532 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 SLAIN1Q8ND83 568 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 RNF139Q8WU17 664 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 NKD2Q969F2 451 aaPredicted RBP12.39□□□□□ -0.43
CCDC38-202ENST00000546386 C11orf84Q9BUA3 381 aaPredicted RBP12.39□□□□□ -0.43
CCDC38-202ENST00000546386 WDCPQ9H6R7 721 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 GGT7Q9UJ14 662 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 CDH9Q9ULB4 789 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 FZD10Q9ULW2 581 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 MAD1L1Q9Y6D9 718 aa12.39□□□□□ -0.43
CCDC38-202ENST00000546386 A0A1W2PQH9 124 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 EPHB2P29323 1055 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 GMPRP36959 345 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 GPX6P59796 221 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 MPP2Q14168 576 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 TFAP2DQ7Z6R9 452 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 CASP10Q92851 521 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 BHMTQ93088 406 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 COLEC11Q9BWP8 271 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 ALG13Q9NP73 1137 aaKnown RBP12.38□□□□□ -0.43
CCDC38-202ENST00000546386 HOMER3Q9NSC5 361 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 EXOC1LA0A1B0GW35 172 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 A0A1W2PPM1 405 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 EEF2KO00418 725 aaKnown RBP12.38□□□□□ -0.43
CCDC38-202ENST00000546386 PYGBP11216 843 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 CHN1P15882 459 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 RPL9P32969 192 aaKnown RBP12.38□□□□□ -0.43
CCDC38-202ENST00000546386 NOS2P35228 1153 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 ARL4AP40617 200 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 ELK3P41970 407 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 PGGT1BP53609 377 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 TSPY1Q01534 308 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 PPP2R5DQ14738 602 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 SLMAPQ14BN4 828 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 DCLRE1AQ6PJP8 1040 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 RNF19BQ6ZMZ0 732 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 EXOC3L1Q86VI1 746 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 CIR1Q86X95 450 aaPredicted RBP12.38□□□□□ -0.43
CCDC38-202ENST00000546386 STK32AQ8WU08 396 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 PYROXD1Q8WU10 500 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 SLCO2A1Q92959 643 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 FAXDC2Q96IV6 333 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 NPY6RQ99463 290 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 PRMT1Q99873 361 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms