RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 FAF1Q9UNN5 650 aaPredicted RBP8.87□□□□□ -0.99
CLIP1-218ENST00000545889 HES2Q9Y543 173 aa8.87□□□□□ -0.99
CLIP1-218ENST00000545889 SF3B1O75533 1304 aaKnown RBP eCLIP8.87□□□□□ -0.991e-10■■■■■ 241.2
CLIP1-218ENST00000545889 TARSL2A2RTX5 802 aaKnown RBP8.86□□□□□ -0.99
CLIP1-218ENST00000545889 FANCGO15287 622 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 B4GALT5O43286 388 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 CNMDO75829 334 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 DNAJC8O75937 253 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-218ENST00000545889 VDRP11473 427 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 ALOX15P16050 662 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-218ENST00000545889 PBLDP30039 288 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-218ENST00000545889 SERPINA13PQ6UXR4 307 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 TRMT10CQ7L0Y3 403 aaKnown RBP8.86□□□□□ -0.99
CLIP1-218ENST00000545889 ABRAQ8N0Z2 381 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 SPATA20Q8TB22 786 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 TAS1R2Q8TE23 839 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 C17orf50Q8WW18 174 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 ERLEC1Q96DZ1 483 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 HES6Q96HZ4 224 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 TEKT2Q9UIF3 430 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 APPL1Q9UKG1 709 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 ADAMTS5Q9UNA0 930 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 VPS9D1Q9Y2B5 631 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 DDX60LQ5H9U9 1706 aaKnown RBP8.86□□□□□ -0.99
CLIP1-218ENST00000545889 PSMD12O00232 456 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-218ENST00000545889 TSPAN3O60637 253 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 GLUD1P00367 558 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 HDCP19113 662 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 ITGALP20701 1170 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 C6orf10Q5SRN2 563 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 CCDC80Q76M96 950 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 PLPPR4Q7Z2D5 763 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 CHPFQ8IZ52 775 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 KIAA0319LQ8IZA0 1049 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 TEX9Q8N6V9 391 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 OR2W6PQ8NHA6 318 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 PPTC7Q8NI37 304 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 ARHGEF26Q96DR7 871 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 VMP1Q96GC9 406 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 FAM161BQ96MY7 647 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 CD274Q9NZQ7 290 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 CAPN11Q9UMQ6 739 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 SPECC1L-ADORA2AF8WAN1 911 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 GPR25O00155 361 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 DNM1LO00429 736 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 ADCY6O43306 1168 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 MAFO75444 373 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-218ENST00000545889 SMNDC1O75940 238 aaKnown RBP eCLIP8.86□□□□□ -0.99
CLIP1-218ENST00000545889 SNAI1O95863 264 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-218ENST00000545889 PLEKP08567 350 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-218ENST00000545889 POLR2EP19388 210 aaKnown RBP8.86□□□□□ -0.99
CLIP1-218ENST00000545889 ACAT1P24752 427 aaKnown RBP8.86□□□□□ -0.99
CLIP1-218ENST00000545889 MAGOHP61326 146 aaKnown RBP8.86□□□□□ -0.99
CLIP1-218ENST00000545889 DAB2P98082 770 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 CAV1Q03135 178 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 ORC1Q13415 861 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 SLC5A9Q2M3M2 681 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 C1QTNF12Q5T7M4 302 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 PLPP4Q5VZY2 271 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 NAPEPLDQ6IQ20 393 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 FBXL19Q6PCT2 694 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 PATL1Q86TB9 770 aaKnown RBP8.86□□□□□ -0.99
CLIP1-218ENST00000545889 MAB21L3Q8N8X9 362 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 ZNF784Q8NCA9 323 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-218ENST00000545889 SPIRE2Q8WWL2 714 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 OTULINQ96BN8 352 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 UVRAGQ9P2Y5 699 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 MORF4L1Q9UBU8 362 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 ZMYM2Q9UBW7 1377 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 TSC22D4Q9Y3Q8 395 aa8.86□□□□□ -0.99
CLIP1-218ENST00000545889 MEI4A8MW99 385 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 ANXA9O76027 345 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 HPGDP15428 266 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 HALP42357 657 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 GUCA1AP43080 201 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-218ENST00000545889 SCNN1GP51170 649 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 DDX39BQ13838 428 aaKnown RBP8.85□□□□□ -0.99
CLIP1-218ENST00000545889 NOMO2Q5JPE7 1267 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 RNF220Q5VTB9 566 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 ANKS6Q68DC2 871 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 TRAPPC11Q7Z392 1133 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 XPNPEP1Q9NQW7 623 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 SMARCAL1Q9NZC9 954 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 TRAF3IP3Q9Y228 551 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 UMODL1Q5DID0 1318 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 MCF2P10911 925 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 BRAFP15056 766 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 VEGFBP49765 207 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 ARSEP51690 589 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 GRB14Q14449 540 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 ZNF792Q3KQV3 632 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 USP41Q3LFD5 358 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 SLC39A12Q504Y0 691 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 TPGS1Q6ZTW0 290 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 YTHDF3Q7Z739 585 aaKnown RBP8.85□□□□□ -0.99
CLIP1-218ENST00000545889 ZBED8Q8IZ13 594 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 RCOR2Q8IZ40 523 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 C1orf54Q8WWF1 131 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 SMG7Q92540 1137 aaKnown RBP8.85□□□□□ -0.99
CLIP1-218ENST00000545889 SLC13A1Q9BZW2 595 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms