RNA–Protein interactions for RNA: ENST00000544151.1

LDHB-210, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-210ENST00000544151 TRIP4Q15650 581 aaPredicted RBP16.34■□□□□ 0.21
LDHB-210ENST00000544151 ELF2Q15723 593 aa16.34■□□□□ 0.21
LDHB-210ENST00000544151 RSPO4Q2I0M5 234 aaPredicted RBP16.34■□□□□ 0.21
LDHB-210ENST00000544151 PLK5Q496M5 336 aa16.34■□□□□ 0.21
LDHB-210ENST00000544151 USP39Q53GS9 565 aaKnown RBP16.34■□□□□ 0.21
LDHB-210ENST00000544151 PRR23CQ6ZRP0 262 aa16.34■□□□□ 0.21
LDHB-210ENST00000544151 CHPFQ8IZ52 775 aa16.34■□□□□ 0.21
LDHB-210ENST00000544151 CPXM2Q8N436 756 aa16.34■□□□□ 0.21
LDHB-210ENST00000544151 HMGB4Q8WW32 186 aa16.34■□□□□ 0.21
LDHB-210ENST00000544151 ARRDC1-AS1Q9H2J1 176 aa16.34■□□□□ 0.21
LDHB-210ENST00000544151 ACP6Q9NPH0 428 aa16.34■□□□□ 0.21
LDHB-210ENST00000544151 INVSQ9Y283 1065 aa16.34■□□□□ 0.21
LDHB-210ENST00000544151 PRRT4C9JH25 899 aa16.33■□□□□ 0.2
LDHB-210ENST00000544151 PON1P27169 355 aa16.33■□□□□ 0.2
LDHB-210ENST00000544151 ERCC5P28715 1186 aaPredicted RBP16.33■□□□□ 0.2
LDHB-210ENST00000544151 GPD2P43304 727 aa16.33■□□□□ 0.2
LDHB-210ENST00000544151 CCDC6Q16204 474 aa16.33■□□□□ 0.2
LDHB-210ENST00000544151 MSANTD2Q6P1R3 559 aa16.33■□□□□ 0.2
LDHB-210ENST00000544151 DENND1BQ6P3S1 775 aa16.33■□□□□ 0.2
LDHB-210ENST00000544151 FAM217AQ8IXS0 508 aa16.33■□□□□ 0.2
LDHB-210ENST00000544151 PGBD3Q8N328 593 aa16.33■□□□□ 0.2
LDHB-210ENST00000544151 KCNV2Q8TDN2 545 aa16.33■□□□□ 0.2
LDHB-210ENST00000544151 DDI1Q8WTU0 396 aa16.33■□□□□ 0.2
LDHB-210ENST00000544151 RNF25Q96BH1 459 aaPredicted RBP16.33■□□□□ 0.2
LDHB-210ENST00000544151 FAM149B1Q96BN6 582 aa16.33■□□□□ 0.2
LDHB-210ENST00000544151 LOXL4Q96JB6 756 aa16.33■□□□□ 0.2
LDHB-210ENST00000544151 CDV3Q9UKY7 258 aaKnown RBP16.33■□□□□ 0.2
LDHB-210ENST00000544151 HCN2Q9UL51 889 aa16.33■□□□□ 0.2
LDHB-210ENST00000544151 STARD13Q9Y3M8 1113 aa16.33■□□□□ 0.2
LDHB-210ENST00000544151 MUC22E2RYF6 1773 aaPredicted RBP16.33■□□□□ 0.2
LDHB-210ENST00000544151 CKAP5Q14008 2032 aa16.33■□□□□ 0.2
LDHB-210ENST00000544151 BECN2A8MW95 431 aa16.32■□□□□ 0.2
LDHB-210ENST00000544151 PRR5-ARHGAP8B1AHC4 643 aa16.32■□□□□ 0.2
LDHB-210ENST00000544151 PES1O00541 588 aaKnown RBP16.32■□□□□ 0.2
LDHB-210ENST00000544151 CISD3P0C7P0 127 aa16.32■□□□□ 0.2
LDHB-210ENST00000544151 PYGBP11216 843 aa16.32■□□□□ 0.2
LDHB-210ENST00000544151 NCAM1P13591 858 aa16.32■□□□□ 0.2
LDHB-210ENST00000544151 NTSR1P30989 418 aa16.32■□□□□ 0.2
LDHB-210ENST00000544151 ARHGAP8P85298 464 aa16.32■□□□□ 0.2
LDHB-210ENST00000544151 PUM1Q14671 1186 aaKnown RBP eCLIP16.32■□□□□ 0.29e-8■■□□□ 13
LDHB-210ENST00000544151 CSRP2Q16527 193 aa16.32■□□□□ 0.2
LDHB-210ENST00000544151 MEA1Q16626 185 aa16.32■□□□□ 0.2
LDHB-210ENST00000544151 ZNF606Q8WXB4 792 aa16.32■□□□□ 0.2
LDHB-210ENST00000544151 SHC3Q92529 594 aa16.32■□□□□ 0.2
LDHB-210ENST00000544151 ERLEC1Q96DZ1 483 aa16.32■□□□□ 0.2
LDHB-210ENST00000544151 ZC3H10Q96K80 434 aaKnown RBP16.32■□□□□ 0.2
LDHB-210ENST00000544151 SPACA7Q96KW9 195 aa16.32■□□□□ 0.2
LDHB-210ENST00000544151 ACOX2Q99424 681 aa16.32■□□□□ 0.2
LDHB-210ENST00000544151 TUBGCP2Q9BSJ2 902 aa16.32■□□□□ 0.2
LDHB-210ENST00000544151 DUSP15Q9H1R2 295 aaPredicted RBP16.32■□□□□ 0.2
LDHB-210ENST00000544151 NDST4Q9H3R1 872 aa16.32■□□□□ 0.2
LDHB-210ENST00000544151 CACNA2D2Q9NY47 1150 aa16.32■□□□□ 0.2
LDHB-210ENST00000544151 AJAP1Q9UKB5 411 aaPredicted RBP16.32■□□□□ 0.2
LDHB-210ENST00000544151 KCNJ18B7U540 433 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 E5RJQ4 531 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 SART1O43290 800 aaKnown RBP16.31■□□□□ 0.2
LDHB-210ENST00000544151 TSPAN3O60637 253 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 RHOBTB1O94844 696 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 LATS1O95835 1130 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 BCKDHBP21953 392 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 MPLP40238 635 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 ACADSBP45954 432 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 PDCLQ13371 301 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 KCNJ12Q14500 433 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 GEN1Q17RS7 908 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 VWA3BQ502W6 1294 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 MIIPQ5JXC2 388 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 PMS2CLQ68D20 193 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 SDE2Q6IQ49 451 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 ANKS1BQ7Z6G8 1248 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 C11orf74Q86VG3 221 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 PASD1Q8IV76 773 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 SCUBE3Q8IX30 993 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 C12orf50Q8NA57 414 aaPredicted RBP16.31■□□□□ 0.2
LDHB-210ENST00000544151 GPT2Q8TD30 523 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 SIX2Q9NPC8 291 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 DLL3Q9NYJ7 618 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 CYTH4Q9UIA0 394 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 FBXO10Q9UK96 956 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 SLC27A6Q9Y2P4 619 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 RAD54BQ9Y620 910 aa16.31■□□□□ 0.2
LDHB-210ENST00000544151 GOLGA6L22H0YM25 854 aa16.3■□□□□ 0.2
LDHB-210ENST00000544151 CAPN9O14815 690 aa16.3■□□□□ 0.2
LDHB-210ENST00000544151 IGLV3-27P01718 113 aa16.3■□□□□ 0.2
LDHB-210ENST00000544151 PNMA6AP0CW24 399 aaPredicted RBP16.3■□□□□ 0.2
LDHB-210ENST00000544151 GABRG2P18507 467 aa16.3■□□□□ 0.2
LDHB-210ENST00000544151 HOXD9P28356 352 aaPredicted RBP16.3■□□□□ 0.2
LDHB-210ENST00000544151 RPL34P49207 117 aaKnown RBP16.3■□□□□ 0.2
LDHB-210ENST00000544151 TBX4P57082 545 aa16.3■□□□□ 0.2
LDHB-210ENST00000544151 ZNF445P59923 1031 aa16.3■□□□□ 0.2
LDHB-210ENST00000544151 CREB5Q02930 508 aa16.3■□□□□ 0.2
LDHB-210ENST00000544151 SF3A2Q15428 464 aaKnown RBP16.3■□□□□ 0.2
LDHB-210ENST00000544151 AASDHQ4L235 1098 aaPredicted RBP16.3■□□□□ 0.2
LDHB-210ENST00000544151 MPPE1Q53F39 396 aa16.3■□□□□ 0.2
LDHB-210ENST00000544151 NUGGCQ68CJ6 796 aa16.3■□□□□ 0.2
LDHB-210ENST00000544151 DGLUCYQ7Z3D6 616 aa16.3■□□□□ 0.2
LDHB-210ENST00000544151 OLIG1Q8TAK6 271 aa16.3■□□□□ 0.2
LDHB-210ENST00000544151 DQX1Q8TE96 717 aaKnown RBP16.3■□□□□ 0.2
LDHB-210ENST00000544151 RLN3Q8WXF3 142 aa16.3■□□□□ 0.2
LDHB-210ENST00000544151 SERPINB11Q96P15 392 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms