RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 C2CD2Q9Y426 696 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 MSLNQ13421 630 aaPredicted RBP19.85■□□□□ 0.77
HDAC4-215ENST00000543185 ZNF284Q2VY69 593 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 IL31Q6EBC2 164 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 ARMC6Q6NXE6 501 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 PPP1R14BQ96C90 147 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 ADI1Q9BV57 179 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 TCF4P15884 667 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 VPS72Q15906 364 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 GPAT2Q6NUI2 795 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 RNF149Q8NC42 400 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 MAGEB10Q96LZ2 347 aaPredicted RBP19.85■□□□□ 0.77
HDAC4-215ENST00000543185 SLITRK1Q96PX8 696 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 TRIM10Q9UDY6 481 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 KCNQ3O43525 872 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 ALADP13716 330 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 ZNF438Q7Z4V0 828 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 KDELC2Q7Z4H8 507 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 PRKD2Q9BZL6 878 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 RUVBL2Q9Y230 463 aaKnown RBP19.85■□□□□ 0.77
HDAC4-215ENST00000543185 QPRTQ15274 297 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 QRICH1Q2TAL8 776 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 RPS6KA6Q9UK32 745 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 MBD5Q9P267 1494 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 INPP4BO15327 924 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 HPGDP15428 266 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 PWP1Q13610 501 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 CCNG2Q16589 344 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 CCNB1IP1Q9NPC3 277 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 ENTPD7Q9NQZ7 604 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 CYP2C9P11712 490 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 ATXN10Q9UBB4 475 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 RAB21Q9UL25 225 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 ACTL7BQ9Y614 415 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 ADCY6O43306 1168 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 STARP49675 285 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 OVGP1Q12889 678 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 CUL2Q13617 745 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 LBHD1Q9BQE6 289 aaPredicted RBP19.84■□□□□ 0.77
HDAC4-215ENST00000543185 PIDD1Q9HB75 910 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 RNF146Q9NTX7 359 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 PRMT7Q9NVM4 692 aaPredicted RBP19.84■□□□□ 0.77
HDAC4-215ENST00000543185 ITGADQ13349 1161 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 MSL3Q8N5Y2 521 aaKnown RBP19.84■□□□□ 0.77
HDAC4-215ENST00000543185 SGF29Q96ES7 293 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 DCUN1D5Q9BTE7 237 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 COPS7BQ9H9Q2 264 aaPredicted RBP19.84■□□□□ 0.77
HDAC4-215ENST00000543185 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.84■□□□□ 0.77
HDAC4-215ENST00000543185 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.84■□□□□ 0.777e-7■■■■□ 19.5
HDAC4-215ENST00000543185 NUDT5Q9UKK9 219 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 DMTF1Q9Y222 760 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 DNAJB2P25686 324 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 DDX53Q86TM3 631 aaKnown RBP19.84■□□□□ 0.77
HDAC4-215ENST00000543185 CD302Q8IX05 232 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 DCLK3Q9C098 648 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 RPLP2P05387 115 aaKnown RBP19.84■□□□□ 0.77
HDAC4-215ENST00000543185 PI16Q6UXB8 463 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 EPB41L4AQ9HCS5 686 aaPredicted RBP19.84■□□□□ 0.77
HDAC4-215ENST00000543185 TRPM5Q9NZQ8 1165 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 PADI4Q9UM07 663 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 USP18Q9UMW8 372 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 USP17L10C9JJH3 530 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 FBXO21O94952 628 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 CPA3P15088 417 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 PTGES3Q15185 160 aaKnown RBP19.84■□□□□ 0.77
HDAC4-215ENST00000543185 SYTL1Q8IYJ3 562 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 NEXMIFQ5QGS0 1516 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 IRGMA1A4Y4 181 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 KLRC1P26715 233 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 AGKQ53H12 422 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 LRRC17Q8N6Y2 441 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 HPDLQ96IR7 371 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 MMP19Q99542 508 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 RACGAP1Q9H0H5 632 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 KLHL1Q9NR64 748 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 LNPEPQ9UIQ6 1025 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 AK5Q9Y6K8 562 aa19.84■□□□□ 0.77
HDAC4-215ENST00000543185 RASA1P20936 1047 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 DEPDC4Q8N2C3 294 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 PGM2Q96G03 612 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 GRIP2Q9C0E4 1043 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 WDR41Q9HAD4 459 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 DNAJC16Q9Y2G8 782 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 IQGAP1P46940 1657 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 AFF2P51816 1311 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 GPC1P35052 558 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 FASTKQ14296 549 aaKnown RBP19.83■□□□□ 0.77
HDAC4-215ENST00000543185 ZNF846Q147U1 533 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 PGS1Q32NB8 556 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 NOTUMQ6P988 496 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 CAPSLQ8WWF8 208 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 CROTQ9UKG9 612 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 RIPPLY1Q0D2K3 151 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 GRPEL2Q8TAA5 225 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 POLR1BQ9H9Y6 1135 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 SEC31BQ9NQW1 1179 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 NCAM1P13591 858 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 FAM228AQ86W67 206 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 USP21Q9UK80 565 aa19.83■□□□□ 0.77
HDAC4-215ENST00000543185 NCOA3Q9Y6Q9 1424 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms