RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 KIFAP3Q92845 792 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 CDC6Q99741 560 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 TCHPQ9BT92 498 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 KIFC3Q9BVG8 833 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 MRPL4Q9BYD3 311 aaKnown RBP4.96□□□□□ -1.62
SNHG1-214ENST00000540865 ZCWPW1Q9H0M4 648 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 SEMA6CQ9H3T2 930 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 GSX1Q9H4S2 264 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-214ENST00000540865 C7orf69Q9H7B7 122 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 PLEKHA5Q9HAU0 1116 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 NCOA5Q9HCD5 579 aaKnown RBP4.96□□□□□ -1.62
SNHG1-214ENST00000540865 TUFT1Q9NNX1 390 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 BCCIPQ9P287 314 aaKnown RBP eCLIP4.96□□□□□ -1.62
SNHG1-214ENST00000540865 STOML1Q9UBI4 398 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 TUBGCP4Q9UGJ1 667 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 SUSD2Q9UGT4 822 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 RNF112Q9ULX5 631 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 KCNJ14Q9UNX9 436 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 WNT6Q9Y6F9 365 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 PTPRQQ9UMZ3 2332 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 TRAV19A0A0A6YYK7 116 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 TEX51A0A1B0GUA7 166 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 TCRBV21S2A2A0A5A6 115 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 FAM221AA4D161 298 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 ARHGEF35A5YM69 484 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 MYMKA6NI61 221 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 SGK1O00141 431 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 GFRA2O00451 464 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 CPLX1O14810 134 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 XPOTO43592 962 aaKnown RBP4.95□□□□□ -1.62
SNHG1-214ENST00000540865 ZNF217O75362 1048 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 TOM1L1O75674 476 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 CSH1P0DML2 217 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 CSH2P0DML3 217 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 HAPLN1P10915 354 aaPredicted RBP4.95□□□□□ -1.62
SNHG1-214ENST00000540865 GNSP15586 552 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 XBP1P17861 261 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 RPS6KB1P23443 525 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 ITPKBP27987 946 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 NMT1P30419 496 aaKnown RBP4.95□□□□□ -1.62
SNHG1-214ENST00000540865 NTF4P34130 210 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 EIF2DP41214 584 aaKnown RBP4.95□□□□□ -1.62
SNHG1-214ENST00000540865 TXKP42681 527 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 TNFRSF4P43489 277 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 KIR2DL1P43626 348 aaPredicted RBP4.95□□□□□ -1.62
SNHG1-214ENST00000540865 PWP1Q13610 501 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 SMAD1Q15797 465 aaKnown RBP4.95□□□□□ -1.62
SNHG1-214ENST00000540865 ZBTB6Q15916 424 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 PLEKHG6Q3KR16 790 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 WDR45BQ5MNZ6 344 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 SYCP2LQ5T4T6 812 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 CPLX2Q6PUV4 134 aaKnown RBP4.95□□□□□ -1.62
SNHG1-214ENST00000540865 BLOC1S2Q6QNY1 142 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 DBX2Q6ZNG2 339 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 GPR155Q7Z3F1 870 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 TRMT11Q7Z4G4 463 aaKnown RBP4.95□□□□□ -1.62
SNHG1-214ENST00000540865 CATSPER3Q86XQ3 398 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 TRIML1Q8N9V2 468 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 OR10T2Q8NGX3 314 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 BAHD1Q8TBE0 780 aaPredicted RBP4.95□□□□□ -1.62
SNHG1-214ENST00000540865 SPATA18Q8TC71 538 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 HMGB4Q8WW32 186 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 ISL2Q96A47 359 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 WBP1Q96G27 269 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 ZNF419Q96HQ0 510 aaPredicted RBP4.95□□□□□ -1.62
SNHG1-214ENST00000540865 SENP8Q96LD8 212 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 JAKMIP1Q96N16 626 aaKnown RBP4.95□□□□□ -1.62
SNHG1-214ENST00000540865 AIFM3Q96NN9 605 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 MTMR9Q96QG7 549 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 TSPAN18Q96SJ8 248 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 HNRNPABQ99729 332 aaKnown RBP4.95□□□□□ -1.62
SNHG1-214ENST00000540865 LINC00597Q9H2U6 94 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 ACSS3Q9H6R3 686 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 UBP1Q9NZI7 540 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 UXTQ9UBK9 157 aaPredicted RBP4.95□□□□□ -1.62
SNHG1-214ENST00000540865 DSEQ9UL01 958 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 UBQLN1Q9UMX0 589 aaKnown RBP4.95□□□□□ -1.62
SNHG1-214ENST00000540865 PCDHGB2Q9Y5G2 931 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 MYO9AB2RTY4 2548 aa4.95□□□□□ -1.62
SNHG1-214ENST00000540865 IGHV1OR15-9A0A0B4J2B8 117 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-214ENST00000540865 FAM95CA0A1B0GW59 222 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 TTC26A0AVF1 554 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 ANTXRLA6NF34 631 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 CCDC169A6NNP5 214 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-214ENST00000540865 FLRT2O43155 660 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 RRP8O43159 456 aaKnown RBP4.94□□□□□ -1.62
SNHG1-214ENST00000540865 NEMFO60524 1076 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 CILPO75339 1184 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 MED24O75448 989 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 NOL4O94818 638 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 KAT7O95251 611 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 APODP05090 189 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 CKMP06732 381 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 CLTAP09496 248 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 ATXN1LP0C7T5 689 aaKnown RBP4.94□□□□□ -1.62
SNHG1-214ENST00000540865 HARSP12081 509 aaKnown RBP4.94□□□□□ -1.62
SNHG1-214ENST00000540865 HLA-EP13747 358 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 GABRG2P18507 467 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms