RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 SKIDA1Q1XH10 827 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 SLC25A52Q3SY17 297 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 SCYL2Q6P3W7 929 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 FAM43BQ6ZT52 329 aaPredicted RBP10.53□□□□□ -0.72
LMO3-224ENST00000540848 CPLX4Q7Z7G2 160 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 ZBED8Q8IZ13 594 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 CACNA2D3Q8IZS8 1091 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 PLD5Q8N7P1 536 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 ANKS4BQ8N8V4 417 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 GLIS1Q8NBF1 620 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 UHMK1Q8TAS1 419 aaKnown RBP10.53□□□□□ -0.72
LMO3-224ENST00000540848 SLC2A14Q8TDB8 520 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 PYROXD1Q8WU10 500 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 LRRC39Q96DD0 335 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 PIWIL1Q96J94 861 aaKnown RBP10.53□□□□□ -0.72
LMO3-224ENST00000540848 C9orf72Q96LT7 481 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 SLC9A7Q96T83 725 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 KLC2Q9H0B6 622 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 CXCL16Q9H2A7 254 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 DPEP3Q9H4B8 488 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 SSU72Q9NP77 194 aaKnown RBP10.53□□□□□ -0.72
LMO3-224ENST00000540848 NMRK2Q9NPI5 230 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 NKIRAS1Q9NYS0 192 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 ZMYND8Q9ULU4 1186 aaPredicted RBP10.53□□□□□ -0.72
LMO3-224ENST00000540848 ST3GAL5Q9UNP4 418 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 SMG5Q9UPR3 1016 aaKnown RBP10.53□□□□□ -0.72
LMO3-224ENST00000540848 NAALADL1Q9UQQ1 740 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 FAM169AQ9Y6X4 670 aa10.53□□□□□ -0.72
LMO3-224ENST00000540848 LOC100996750A0A140TA64 210 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 TULP2O00295 520 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 GRAP2O75791 330 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 CABYRO75952 493 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 ZBED1O96006 694 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 GSTA2P09210 222 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 FAM200BP0CF97 657 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 ETS1P14921 441 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 IL4RP24394 825 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 LMO2P25791 158 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 GPC1P35052 558 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 NOS2P35228 1153 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 ARL4AP40617 200 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 SEC24CP53992 1094 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 MRPS5P82675 430 aaKnown RBP10.52□□□□□ -0.72
LMO3-224ENST00000540848 MGAT3Q09327 533 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 TAF5Q15542 800 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 KCTD19Q17RG1 926 aaPredicted RBP10.52□□□□□ -0.72
LMO3-224ENST00000540848 CCDC38Q502W7 563 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 EFHC2Q5JST6 749 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 CYP4F22Q6NT55 531 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 UNC45BQ8IWX7 931 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 CCDC13Q8IYE1 715 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 SIX6OS1Q8N1H7 587 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 FAM71DQ8N9W8 422 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 PCSK9Q8NBP7 692 aaKnown RBP10.52□□□□□ -0.72
LMO3-224ENST00000540848 TRPV1Q8NER1 839 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 PGBD4Q96DM1 585 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 UROC1Q96N76 676 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 ZNF317Q96PQ6 595 aaPredicted RBP10.52□□□□□ -0.72
LMO3-224ENST00000540848 PLCD4Q9BRC7 762 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 TRIM62Q9BVG3 475 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 KRTAP4-6Q9BYQ5 205 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 NRDE2Q9H7Z3 1164 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 VPS37BQ9H9H4 285 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 LRRC4Q9HBW1 653 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 LRRC4CQ9HCJ2 640 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 PSMC3IPQ9P2W1 217 aaPredicted RBP10.52□□□□□ -0.72
LMO3-224ENST00000540848 DSEQ9UL01 958 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 CDH9Q9ULB4 789 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 AP4E1Q9UPM8 1137 aa10.52□□□□□ -0.72
LMO3-224ENST00000540848 CLUHO75153 1309 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 TMEM120BA0PK00 339 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 RASA4BC9J798 803 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 MYO1CO00159 1063 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 PRPF4O43172 522 aaKnown RBP eCLIP10.52□□□□□ -0.73
LMO3-224ENST00000540848 RASA4O43374 803 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 LCP1P13796 627 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 BRAFP15056 766 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 DRD4P21917 467 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 CYP2F1P24903 491 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 L1CAMP32004 1257 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 PSMC4P43686 418 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 GDF10P55107 478 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 GEMIN4P57678 1058 aaKnown RBP10.52□□□□□ -0.73
LMO3-224ENST00000540848 YWHAZP63104 245 aaKnown RBP10.52□□□□□ -0.73
LMO3-224ENST00000540848 CLN3Q13286 438 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 ITIH4Q14624 930 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 SLC45A4Q5BKX6 768 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 SH3PXD2AQ5TCZ1 1133 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 GDF6Q6KF10 455 aaPredicted RBP10.52□□□□□ -0.73
LMO3-224ENST00000540848 PIGZQ86VD9 579 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 TAX1BP1Q86VP1 789 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 FUKQ8N0W3 1084 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 PQLC3Q8N755 202 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 ARRDC4Q8NCT1 418 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 MCUQ8NE86 351 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 PCDH19Q8TAB3 1148 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 MDM1Q8TC05 714 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 DYDC1Q8WWB3 177 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 MAML1Q92585 1016 aa10.52□□□□□ -0.73
LMO3-224ENST00000540848 APBB2Q92870 758 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms