RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 AMPD1P23109 780 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 CST5P28325 142 aaPredicted RBP14.26□□□□□ -0.13
RTN3-210ENST00000540798 TKTL1P51854 596 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 AIF1P55008 147 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 MAP3K7CLP57077 242 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 DAOAP59103 153 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 IL9RQ01113 521 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 DCAF6Q58WW2 860 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 SYPL2Q5VXT5 272 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 BHLHA9Q7RTU4 235 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 FAM131BQ86XD5 332 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 CCDC110Q8TBZ0 833 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 SLC44A1Q8WWI5 657 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 PGAP3Q96FM1 320 aaPredicted RBP14.26□□□□□ -0.13
RTN3-210ENST00000540798 PCED1BQ96HM7 432 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 RTP3Q9BQQ7 232 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 LRRC4Q9HBW1 653 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 CSNK1G1Q9HCP0 422 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 TMEM30AQ9NV96 361 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 MFHAS1Q9Y4C4 1052 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 TTLL3Q9Y4R7 772 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 DNM1LO00429 736 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 NRP1O14786 923 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 MGEA5O60502 916 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 AVILO75366 819 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 SPAG7O75391 227 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 MAP3K6O95382 1288 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 METTL18O95568 372 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 RAB27AP51159 221 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 SCNN1GP51170 649 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 CACNB2Q08289 660 aaPredicted RBP14.26□□□□□ -0.13
RTN3-210ENST00000540798 SCAPQ12770 1279 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 TRIM32Q13049 653 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 SEMA5AQ13591 1074 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 PRKD1Q15139 912 aaPredicted RBP14.26□□□□□ -0.13
RTN3-210ENST00000540798 CD300LGQ6UXG3 332 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 NTAN1Q96AB6 310 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 ZIC5Q96T25 663 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 CNGB3Q9NQW8 809 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 GRID1Q9ULK0 1009 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 STAP1Q9ULZ2 295 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 USP15Q9Y4E8 981 aaPredicted RBP14.26□□□□□ -0.13
RTN3-210ENST00000540798 MYBPHLA2RUH7 354 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 CYP11A1P05108 521 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 GSTA2P09210 222 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 VAV1P15498 845 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 RPA3P35244 121 aaPredicted RBP14.26□□□□□ -0.13
RTN3-210ENST00000540798 FLT3LGP49771 235 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 DPYSQ14117 519 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 PAFAH1B3Q15102 231 aaKnown RBP14.26□□□□□ -0.13
RTN3-210ENST00000540798 FAM26DQ5JW98 314 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 HFE2Q6ZVN8 426 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 SIX6OS1Q8N1H7 587 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 RNF169Q8NCN4 708 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 FAM149B1Q96BN6 582 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 MED10Q9BTT4 135 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 PADI3Q9ULW8 664 aa14.26□□□□□ -0.13
RTN3-210ENST00000540798 ARL4AP40617 200 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 MSH2P43246 934 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 CACNA2D1P54289 1103 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 SEMA3BQ13214 749 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 MTFR1Q15390 333 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 NUGGCQ68CJ6 796 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 SH2D5Q6ZV89 423 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 BZW1Q7L1Q6 419 aaKnown RBP14.25□□□□□ -0.13
RTN3-210ENST00000540798 TAX1BP1Q86VP1 789 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 C4orf33Q8N1A6 199 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 RNF139Q8WU17 664 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 PKMYT1Q99640 499 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 WDR6Q9NNW5 1121 aaKnown RBP14.25□□□□□ -0.13
RTN3-210ENST00000540798 PIGVQ9NUD9 493 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 CCDC189A1A4V9 331 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 ASGR1P07306 291 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 PRKCHP24723 683 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 MTM1Q13496 603 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 SPARCL1Q14515 664 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 PDK4Q16654 411 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 TRIM71Q2Q1W2 868 aaKnown RBP14.25□□□□□ -0.13
RTN3-210ENST00000540798 TIGD5Q53EQ6 642 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 FAM171BQ6P995 826 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 GPRIN1Q7Z2K8 1008 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 VPS52Q8N1B4 723 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 MICALL1Q8N3F8 863 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 BANPQ8N9N5 519 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 LRRN4Q8WUT4 740 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 TFB1MQ8WVM0 346 aaKnown RBP14.25□□□□□ -0.13
RTN3-210ENST00000540798 PAAF1Q9BRP4 392 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 ULBP1Q9BZM6 244 aa14.25□□□□□ -0.13
RTN3-210ENST00000540798 DNAH12Q6ZR08 3092 aa14.24□□□□□ -0.13
RTN3-210ENST00000540798 H3BRJ5 948 aa14.24□□□□□ -0.13
RTN3-210ENST00000540798 M0QYT0 321 aa14.24□□□□□ -0.13
RTN3-210ENST00000540798 TRDMT1O14717 391 aaKnown RBP14.24□□□□□ -0.13
RTN3-210ENST00000540798 INPPL1O15357 1258 aa14.24□□□□□ -0.13
RTN3-210ENST00000540798 MFSD11O43934 449 aa14.24□□□□□ -0.13
RTN3-210ENST00000540798 AP1G2O75843 785 aa14.24□□□□□ -0.13
RTN3-210ENST00000540798 ZWINTO95229 277 aa14.24□□□□□ -0.13
RTN3-210ENST00000540798 GLUD2P49448 558 aa14.24□□□□□ -0.13
RTN3-210ENST00000540798 SLC1A5Q15758 541 aa14.24□□□□□ -0.13
RTN3-210ENST00000540798 FAM182AQ5T1J6 154 aa14.24□□□□□ -0.13
RTN3-210ENST00000540798 FAXCQ5TGI0 409 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms