RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 FAM200BP0CF97 657 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 RARGP13631 454 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 PRKCHP24723 683 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 CASP1P29466 404 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 OXTRP30559 389 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 MATKP42679 507 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 PLA2G4AP47712 749 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 MCCD1P59942 119 aaPredicted RBP7.68□□□□□ -1.18
YBX3-209ENST00000540747 DLG4P78352 724 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 GOLGA8FQ08AF8 430 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 GOLGA8DPQ0D2H9 430 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 BIRC3Q13489 604 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 CAMK2GQ13555 558 aaPredicted RBP7.68□□□□□ -1.18
YBX3-209ENST00000540747 ZNF234Q14588 700 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 STARD3Q14849 445 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 EIF4HQ15056 248 aaKnown RBP7.68□□□□□ -1.18
YBX3-209ENST00000540747 SMAD1Q15797 465 aaKnown RBP7.68□□□□□ -1.18
YBX3-209ENST00000540747 KNOP1Q1ED39 458 aaKnown RBP7.68□□□□□ -1.18
YBX3-209ENST00000540747 IL27RAQ6UWB1 636 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 SV2AQ7L0J3 742 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 MARCH9Q86YJ5 346 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 TMPRSS6Q8IU80 811 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 SCUBE3Q8IX30 993 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 CPXM2Q8N436 756 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 TMC2Q8TDI7 906 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 TAF4BQ92750 862 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 BHMTQ93088 406 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 SIPA1Q96FS4 1042 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 CDC6Q99741 560 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 NACA2Q9H009 215 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 KCTD10Q9H3F6 313 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 MAGEF1Q9HAY2 307 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 APOBEC3GQ9HC16 384 aaKnown RBP7.68□□□□□ -1.18
YBX3-209ENST00000540747 FAM49BQ9NUQ9 324 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 ELOVL2Q9NXB9 296 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 CLIC5Q9NZA1 410 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 TFIP11Q9UBB9 837 aaKnown RBP7.68□□□□□ -1.18
YBX3-209ENST00000540747 EIF2B4Q9UI10 523 aaKnown RBP7.68□□□□□ -1.18
YBX3-209ENST00000540747 NUDT5Q9UKK9 219 aa7.68□□□□□ -1.18
YBX3-209ENST00000540747 A0A1B0GVT2 93 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 SPTLC2O15270 562 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 PCDHGA12O60330 932 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 EXOC3O60645 756 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 PHACTR2O75167 634 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 ADORA2BP29275 332 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 PSEN1P49768 467 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 AMPD3Q01432 767 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 SGSM1Q2NKQ1 1148 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 KIF19Q2TAC6 998 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 C10orf120Q5SQS8 335 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 SPOPLQ6IQ16 392 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 BHLHA9Q7RTU4 235 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 ANKS1BQ7Z6G8 1248 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 KIAA0907Q7Z7F0 614 aaPredicted RBP7.67□□□□□ -1.18
YBX3-209ENST00000540747 ZC3H3Q8IXZ2 948 aaKnown RBP7.67□□□□□ -1.18
YBX3-209ENST00000540747 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.67□□□□□ -1.18
YBX3-209ENST00000540747 IQUBQ8NA54 791 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 KIAA0895Q8NCT3 520 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 GOLGA5Q8TBA6 731 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 ADAM32Q8TC27 787 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 HNRNPLLQ8WVV9 542 aaKnown RBP7.67□□□□□ -1.18
YBX3-209ENST00000540747 SORCS1Q8WY21 1168 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 DHX58Q96C10 678 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 CRELD1Q96HD1 420 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 NUP58Q9BVL2 599 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 SLC2A11Q9BYW1 496 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 TMEM245Q9H330 911 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 C6orf106Q9H6K1 298 aaPredicted RBP7.67□□□□□ -1.18
YBX3-209ENST00000540747 SLC39A2Q9NP94 309 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 AGO1Q9UL18 857 aaKnown RBP7.67□□□□□ -1.18
YBX3-209ENST00000540747 ZNF510Q9Y2H8 683 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.67□□□□□ -1.18
YBX3-209ENST00000540747 NAV2Q8IVL1 2488 aa7.67□□□□□ -1.18
YBX3-209ENST00000540747 SPTA1P02549 2419 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 TRABD2BA6NFA1 517 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 E9PAM4 449 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 IKBKBO14920 756 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 TNFSF14O43557 240 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 TSPAN3O60637 253 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 CUTAO60888 179 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 C1QL1O75973 258 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 YEATS4O95619 227 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 HLA-DRAP01903 254 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 P4HA1P13674 534 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 HOXD9P28356 352 aaPredicted RBP7.66□□□□□ -1.18
YBX3-209ENST00000540747 CORO1AP31146 461 aaKnown RBP7.66□□□□□ -1.18
YBX3-209ENST00000540747 ACSL1P33121 698 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 CHKAP35790 457 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 CTSKP43235 329 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 GRIA4P48058 902 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 CSNK1EP49674 416 aaKnown RBP7.66□□□□□ -1.18
YBX3-209ENST00000540747 AFF3P51826 1226 aaKnown RBP7.66□□□□□ -1.18
YBX3-209ENST00000540747 CYP4F3Q08477 520 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 PDE4CQ08493 712 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 STK4Q13043 487 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 CUL4BQ13620 913 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 STK38Q15208 465 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 RAB41Q5JT25 222 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 KCNT1Q5JUK3 1230 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 GALNT15Q8N3T1 639 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms