RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 PCDHAC1Q9H158 963 aa4.25□□□□□ -1.73
MDM2-227ENST00000540709 AGO4Q9HCK5 861 aaKnown RBP4.25□□□□□ -1.73
MDM2-227ENST00000540709 MLXIPLQ9NP71 852 aa4.25□□□□□ -1.73
MDM2-227ENST00000540709 ZMYND8Q9ULU4 1186 aaPredicted RBP4.25□□□□□ -1.73
MDM2-227ENST00000540709 COG5Q9UP83 839 aa4.25□□□□□ -1.73
MDM2-227ENST00000540709 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.25□□□□□ -1.73
MDM2-227ENST00000540709 AREL1O15033 823 aa4.24□□□□□ -1.73
MDM2-227ENST00000540709 USP12O75317 370 aa4.24□□□□□ -1.73
MDM2-227ENST00000540709 TULP3O75386 442 aa4.24□□□□□ -1.73
MDM2-227ENST00000540709 NDST3O95803 873 aa4.24□□□□□ -1.73
MDM2-227ENST00000540709 ALADP13716 330 aa4.24□□□□□ -1.73
MDM2-227ENST00000540709 IDEP14735 1019 aa4.24□□□□□ -1.73
MDM2-227ENST00000540709 HOXA7P31268 230 aaPredicted RBP4.24□□□□□ -1.73
MDM2-227ENST00000540709 FOXG1P55316 489 aaPredicted RBP4.24□□□□□ -1.73
MDM2-227ENST00000540709 GAB1Q13480 694 aa4.24□□□□□ -1.73
MDM2-227ENST00000540709 KCNJ12Q14500 433 aa4.24□□□□□ -1.73
MDM2-227ENST00000540709 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
MDM2-227ENST00000540709 RAP1GAP2Q684P5 730 aa4.24□□□□□ -1.73
MDM2-227ENST00000540709 ZNF517Q6ZMY9 492 aaPredicted RBP4.24□□□□□ -1.73
MDM2-227ENST00000540709 DEF8Q6ZN54 512 aa4.24□□□□□ -1.73
MDM2-227ENST00000540709 FAM57BQ71RH2 274 aa4.24□□□□□ -1.73
MDM2-227ENST00000540709 SAMD14Q8IZD0 417 aaPredicted RBP4.24□□□□□ -1.73
MDM2-227ENST00000540709 CELF1Q92879 486 aaKnown RBP4.24□□□□□ -1.73
MDM2-227ENST00000540709 VCPIP1Q96JH7 1222 aa4.24□□□□□ -1.73
MDM2-227ENST00000540709 ZFYVE19Q96K21 471 aa4.24□□□□□ -1.73
MDM2-227ENST00000540709 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.24□□□□□ -1.73
MDM2-227ENST00000540709 IPO11Q9UI26 975 aaKnown RBP4.24□□□□□ -1.73
MDM2-227ENST00000540709 MAN2B2Q9Y2E5 1009 aa4.24□□□□□ -1.73
MDM2-227ENST00000540709 SPATA31A1Q5TZJ5 1347 aa4.23□□□□□ -1.73
MDM2-227ENST00000540709 B4DGG1 531 aa4.23□□□□□ -1.73
MDM2-227ENST00000540709 SYF2O95926 243 aaKnown RBP4.23□□□□□ -1.73
MDM2-227ENST00000540709 RPS6KB1P23443 525 aa4.23□□□□□ -1.73
MDM2-227ENST00000540709 THBS4P35443 961 aa4.23□□□□□ -1.73
MDM2-227ENST00000540709 IDUAP35475 653 aa4.23□□□□□ -1.73
MDM2-227ENST00000540709 SLC12A2P55011 1212 aa4.23□□□□□ -1.73
MDM2-227ENST00000540709 IFIT5Q13325 482 aaKnown RBP4.23□□□□□ -1.73
MDM2-227ENST00000540709 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.23□□□□□ -1.73
MDM2-227ENST00000540709 MRNIPQ6NTE8 343 aa4.23□□□□□ -1.73
MDM2-227ENST00000540709 DHRS13Q6UX07 377 aa4.23□□□□□ -1.73
MDM2-227ENST00000540709 KYAT3Q6YP21 454 aaKnown RBP4.23□□□□□ -1.73
MDM2-227ENST00000540709 RBM44Q6ZP01 1051 aaKnown RBP4.23□□□□□ -1.73
MDM2-227ENST00000540709 PIP4P1Q86T03 277 aa4.23□□□□□ -1.73
MDM2-227ENST00000540709 KAT2BQ92831 832 aa4.23□□□□□ -1.73
MDM2-227ENST00000540709 SLC25A28Q96A46 364 aa4.23□□□□□ -1.73
MDM2-227ENST00000540709 SNX27Q96L92 541 aa4.23□□□□□ -1.73
MDM2-227ENST00000540709 NLRP4Q96MN2 994 aa4.23□□□□□ -1.73
MDM2-227ENST00000540709 SENP7Q9BQF6 1050 aa4.23□□□□□ -1.73
MDM2-227ENST00000540709 TRIM2Q9C040 744 aa4.23□□□□□ -1.73
MDM2-227ENST00000540709 FAM234AQ9H0X4 552 aa4.23□□□□□ -1.73
MDM2-227ENST00000540709 IGKV2D-30A0A075B6S6 120 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 CCDC187A0A096LP49 1063 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 FAM90A10PA6NDY2 464 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 PRYO14603 147 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 KCNAB3O43448 404 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 ALPLP05186 524 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 PECAM1P16284 738 aaPredicted RBP4.22□□□□□ -1.73
MDM2-227ENST00000540709 TSHRP16473 764 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 MMP8P22894 467 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 MST1P26927 711 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 NDUFS1P28331 727 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 DUSP1P28562 367 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 IL6STP40189 918 aaPredicted RBP4.22□□□□□ -1.73
MDM2-227ENST00000540709 AGTR2P50052 363 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 PRTGQ2VWP7 1150 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 ARL13BQ3SXY8 428 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 LEXMQ3ZCV2 418 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 DAB2IPQ5VWQ8 1189 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 RUSC1-AS1Q66K80 236 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 CCDC144NLQ6NUI1 221 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 KRT27Q7Z3Y8 459 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 ZDHHC17Q8IUH5 632 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 MMP21Q8N119 569 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 TMEM199Q8N511 208 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 PMM1Q92871 262 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 TTLL2Q9BWV7 592 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 AAMDCQ9H7C9 122 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 MOV10Q9HCE1 1003 aaKnown RBP4.22□□□□□ -1.73
MDM2-227ENST00000540709 METTL14Q9HCE5 456 aaKnown RBP4.22□□□□□ -1.73
MDM2-227ENST00000540709 DDX21Q9NR30 783 aaKnown RBP eCLIP4.22□□□□□ -1.73
MDM2-227ENST00000540709 RGS17Q9UGC6 210 aaPredicted RBP4.22□□□□□ -1.73
MDM2-227ENST00000540709 ANAPC4Q9UJX5 808 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 CEP83Q9Y592 693 aa4.22□□□□□ -1.73
MDM2-227ENST00000540709 IGLV5-39A0A0G2JS06 123 aa4.21□□□□□ -1.74
MDM2-227ENST00000540709 A0A1W2PPC1 479 aa4.21□□□□□ -1.74
MDM2-227ENST00000540709 CLCA1A8K7I4 914 aa4.21□□□□□ -1.74
MDM2-227ENST00000540709 F8W810 466 aa4.21□□□□□ -1.74
MDM2-227ENST00000540709 APAF1O14727 1248 aa4.21□□□□□ -1.74
MDM2-227ENST00000540709 ZC3H11AO75152 810 aaKnown RBP eCLIP4.21□□□□□ -1.749e-7■□□□□ 9.3
MDM2-227ENST00000540709 NDUFB8O95169 186 aa4.21□□□□□ -1.74
MDM2-227ENST00000540709 VIPP01282 170 aa4.21□□□□□ -1.74
MDM2-227ENST00000540709 HARSP12081 509 aaKnown RBP4.21□□□□□ -1.74
MDM2-227ENST00000540709 HOXB6P17509 224 aaKnown RBP4.21□□□□□ -1.74
MDM2-227ENST00000540709 SLC8A1P32418 973 aa4.21□□□□□ -1.74
MDM2-227ENST00000540709 HOXD12P35452 270 aa4.21□□□□□ -1.74
MDM2-227ENST00000540709 CASP5P51878 434 aa4.21□□□□□ -1.74
MDM2-227ENST00000540709 RAPGEF1Q13905 1077 aa4.21□□□□□ -1.74
MDM2-227ENST00000540709 SAFBQ15424 915 aaKnown RBP eCLIP4.21□□□□□ -1.74
MDM2-227ENST00000540709 TWIST1Q15672 202 aa4.21□□□□□ -1.74
MDM2-227ENST00000540709 ZNF549Q6P9A3 640 aa4.21□□□□□ -1.74
MDM2-227ENST00000540709 FBXO38Q6PIJ6 1188 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms