RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 KRT5P13647 590 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 CD44P16070 742 aaKnown RBP10.85□□□□□ -0.67
CDCA3-208ENST00000540683 SLC6A11P48066 632 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 PXNP49023 591 aaPredicted RBP10.85□□□□□ -0.67
CDCA3-208ENST00000540683 BPIFB4P59827 614 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 CREB5Q02930 508 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 SRSF5Q13243 272 aaKnown RBP10.85□□□□□ -0.67
CDCA3-208ENST00000540683 TRIP4Q15650 581 aaPredicted RBP10.85□□□□□ -0.67
CDCA3-208ENST00000540683 EXOC3L4Q17RC7 722 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 SYCP2LQ5T4T6 812 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 ADGRF1Q5T601 910 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 MSANTD2Q6P1R3 559 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 CREBRFQ8IUR6 639 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 DENND1CQ8IV53 801 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 FMNL3Q8IVF7 1028 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 PHTF2Q8N3S3 785 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 UBR7Q8N806 425 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 MDGA1Q8NFP4 955 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 SLC35F5Q8WV83 523 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 HMGB4Q8WW32 186 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 EZH1Q92800 747 aaPredicted RBP10.85□□□□□ -0.67
CDCA3-208ENST00000540683 ERCC4Q92889 916 aaPredicted RBP10.85□□□□□ -0.67
CDCA3-208ENST00000540683 GBP4Q96PP9 640 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 GABRG3Q99928 467 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 NUSAP1Q9BXS6 441 aaKnown RBP10.85□□□□□ -0.67
CDCA3-208ENST00000540683 INTS2Q9H0H0 1204 aaKnown RBP10.85□□□□□ -0.67
CDCA3-208ENST00000540683 THAP9Q9H5L6 903 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 OSER1Q9NX31 292 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 FBXO10Q9UK96 956 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 AGO1Q9UL18 857 aaKnown RBP10.85□□□□□ -0.67
CDCA3-208ENST00000540683 PLA2G4CQ9UP65 541 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 CNTN6Q9UQ52 1028 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 BCLAF3A2AJT9 711 aaKnown RBP10.84□□□□□ -0.67
CDCA3-208ENST00000540683 SGK1O00141 431 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 CAPN9O14815 690 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 SCAMP3O14828 347 aaKnown RBP10.84□□□□□ -0.67
CDCA3-208ENST00000540683 GREM1O60565 184 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 NDUFS2O75306 463 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 LTFP02788 710 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 ATP5BP06576 529 aaKnown RBP10.84□□□□□ -0.67
CDCA3-208ENST00000540683 HMBSP08397 361 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 LCP1P13796 627 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 TGM1P22735 817 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 ERCC5P28715 1186 aaPredicted RBP10.84□□□□□ -0.67
CDCA3-208ENST00000540683 OXTRP30559 389 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 P2RY2P41231 377 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 MTIF2P46199 727 aaKnown RBP10.84□□□□□ -0.67
CDCA3-208ENST00000540683 ATXN1P54253 815 aaKnown RBP10.84□□□□□ -0.67
CDCA3-208ENST00000540683 STX17P56962 302 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 DAOAP59103 153 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 PTK2Q05397 1052 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 PKDCCQ504Y2 493 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 PLA2G2CQ5R387 149 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 ACBD5Q5T8D3 534 aaPredicted RBP10.84□□□□□ -0.67
CDCA3-208ENST00000540683 NAIF1Q69YI7 327 aaPredicted RBP10.84□□□□□ -0.67
CDCA3-208ENST00000540683 METTL3Q86U44 580 aaKnown RBP10.84□□□□□ -0.67
CDCA3-208ENST00000540683 C12orf40Q86WS4 652 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 FAM217AQ8IXS0 508 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 MSANTD4Q8NCY6 345 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 OLIG1Q8TAK6 271 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 UBA3Q8TBC4 463 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 FOXJ1Q92949 421 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 TMA16Q96EY4 203 aaKnown RBP10.84□□□□□ -0.67
CDCA3-208ENST00000540683 DUSP15Q9H1R2 295 aaPredicted RBP10.84□□□□□ -0.67
CDCA3-208ENST00000540683 UBE2TQ9NPD8 197 aaPredicted RBP10.84□□□□□ -0.67
CDCA3-208ENST00000540683 ST7Q9NRC1 585 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 C2orf42Q9NWW7 574 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 APEX2Q9UBZ4 518 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 SUSD2Q9UGT4 822 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 STOML2Q9UJZ1 356 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 DAAM1Q9Y4D1 1078 aa10.84□□□□□ -0.67
CDCA3-208ENST00000540683 MYOFQ9NZM1 2061 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 GADD45BO75293 160 aaPredicted RBP10.83□□□□□ -0.68
CDCA3-208ENST00000540683 MOCS3O95396 460 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 APOEP02649 317 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 GLI1P08151 1106 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 ACADMP11310 421 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 GNSP15586 552 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 GNA15P30679 374 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 DHPSP49366 369 aaPredicted RBP10.83□□□□□ -0.68
CDCA3-208ENST00000540683 ATXN3P54252 364 aaPredicted RBP10.83□□□□□ -0.68
CDCA3-208ENST00000540683 OXCT1P55809 520 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 CAMK4Q16566 473 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 MAN2A1Q16706 1144 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 LYSMD4Q5XG99 296 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 RNF43Q68DV7 783 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 TRIM65Q6PJ69 517 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 RRAGAQ7L523 313 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 SYT12Q8IV01 421 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 AHI1Q8N157 1196 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 ANKRD20A12PQ8NF67 263 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 LMO3Q8TAP4 145 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 IPO4Q8TEX9 1081 aaKnown RBP10.83□□□□□ -0.68
CDCA3-208ENST00000540683 FAM149B1Q96BN6 582 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 TPSD1Q9BZJ3 242 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 NUP62CLQ9H1M0 184 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 CLSTN2Q9H4D0 955 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 POPDC2Q9HBU9 364 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 PARD6AQ9NPB6 346 aa10.83□□□□□ -0.68
CDCA3-208ENST00000540683 EVLQ9UI08 416 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms