RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 LEFTY2O00292 366 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 XPO1O14980 1071 aaKnown RBP11.97□□□□□ -0.49
TMEM258-205ENST00000540434 LCP1P13796 627 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 CDK11BP21127 795 aaKnown RBP11.97□□□□□ -0.49
TMEM258-205ENST00000540434 PLA2G4AP47712 749 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 BCAT1P54687 386 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 IRX4P78413 519 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 SIM1P81133 766 aaPredicted RBP11.97□□□□□ -0.49
TMEM258-205ENST00000540434 ADIGQ0VDE8 80 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 BST2Q10589 180 aaKnown RBP11.97□□□□□ -0.49
TMEM258-205ENST00000540434 USP4Q13107 963 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 ZNF268Q14587 947 aaPredicted RBP11.97□□□□□ -0.49
TMEM258-205ENST00000540434 HECTD3Q5T447 861 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 PM20D1Q6GTS8 502 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 CCDC186Q7Z3E2 898 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 YAF2Q8IY57 180 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 MDM1Q8TC05 714 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 OVCA2Q8WZ82 227 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 HHIPQ96QV1 700 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 EBF3Q9H4W6 596 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 FBRSL1Q9HCM7 1045 aaKnown RBP11.97□□□□□ -0.49
TMEM258-205ENST00000540434 PNPLA8Q9NP80 782 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 RTN4Q9NQC3 1192 aaKnown RBP11.97□□□□□ -0.49
TMEM258-205ENST00000540434 FAM207AQ9NSI2 230 aaPredicted RBP11.97□□□□□ -0.49
TMEM258-205ENST00000540434 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.97□□□□□ -0.49
TMEM258-205ENST00000540434 OBP2AQ9NY56 170 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 ARHGAP26Q9UNA1 814 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 RAXQ9Y2V3 346 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 GON4LQ3T8J9 2241 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 YJEFN3A6XGL0 299 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 E7ENQ6 273 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 DPYSL4O14531 572 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 THAP12O43422 761 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 TLR5O60602 858 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 FYNP06241 537 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 MBL2P11226 248 aaPredicted RBP11.96□□□□□ -0.49
TMEM258-205ENST00000540434 RARGP13631 454 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 GNA15P30679 374 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 RPL34P49207 117 aaKnown RBP11.96□□□□□ -0.49
TMEM258-205ENST00000540434 JAM2P57087 298 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 POLR2FP61218 127 aaKnown RBP11.96□□□□□ -0.49
TMEM258-205ENST00000540434 UBXN1Q04323 297 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 C19orf57Q0VDD7 668 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 RAPGEF1Q13905 1077 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 MTF1Q14872 753 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 GAB4Q2WGN9 574 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 EML3Q32P44 896 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 ENOSF1Q7L5Y1 443 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 PASD1Q8IV76 773 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 KCTD13Q8WZ19 329 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 PIWIL1Q96J94 861 aaKnown RBP11.96□□□□□ -0.49
TMEM258-205ENST00000540434 KLF16Q9BXK1 252 aaPredicted RBP11.96□□□□□ -0.49
TMEM258-205ENST00000540434 FBXO44Q9H4M3 255 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 NLRC4Q9NPP4 1024 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 CFAP97Q9P2B7 532 aa11.96□□□□□ -0.49
TMEM258-205ENST00000540434 TNRC6BQ9UPQ9 1833 aaKnown RBP11.95□□□□□ -0.5
TMEM258-205ENST00000540434 KHNYNO15037 678 aaKnown RBP11.95□□□□□ -0.5
TMEM258-205ENST00000540434 ZBED1O96006 694 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 KLKB1P03952 638 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 IRF1P10914 325 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 PLA2G2AP14555 144 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 TCF3P15923 654 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 CHRNB2P17787 502 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 PPP3CCP48454 512 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 DAOAP59103 153 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 MESP2Q0VG99 397 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 TAF5Q15542 800 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 SKOR2Q2VWA4 1001 aaPredicted RBP11.95□□□□□ -0.5
TMEM258-205ENST00000540434 ARHGAP29Q52LW3 1261 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 TMEM196Q5HYL7 178 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 FSTL4Q6MZW2 842 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 NOP9Q86U38 636 aaKnown RBP11.95□□□□□ -0.5
TMEM258-205ENST00000540434 SCUBE3Q8IX30 993 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 CAMKK1Q8N5S9 505 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 PDZD8Q8NEN9 1154 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 SLC20A1Q8WUM9 679 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 EDEM1Q92611 657 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 ERGIC2Q96RQ1 377 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 SLC4A5Q9BY07 1137 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 STK33Q9BYT3 514 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 MIS12Q9H081 205 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 CYLDQ9NQC7 956 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 TLR8Q9NR97 1041 aaKnown RBP11.95□□□□□ -0.5
TMEM258-205ENST00000540434 EHD2Q9NZN4 543 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 HESX1Q9UBX0 185 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 NAGPAQ9UK23 515 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 SLC8A2Q9UPR5 921 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 ADAMTS9Q9P2N4 1935 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 PLXNB3Q9ULL4 1909 aa11.95□□□□□ -0.5
TMEM258-205ENST00000540434 FAM221BA6H8Z2 402 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 SMTNL1A8MU46 457 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 F8VZ95 297 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 PAPSS1O43252 624 aaPredicted RBP11.94□□□□□ -0.5
TMEM258-205ENST00000540434 KALRNO60229 2985 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 GFPT2O94808 682 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 SETSIPP0DME0 302 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 CYP11B1P15538 503 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 GBP1P32455 592 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 MAPK8P45983 427 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 YWHAGP61981 247 aaKnown RBP eCLIP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms