RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.36□□□□□ -1.39
PDZRN4-203ENST00000539469 SLC24A5Q71RS6 500 aa6.36□□□□□ -1.39
PDZRN4-203ENST00000539469 ZNF438Q7Z4V0 828 aa6.36□□□□□ -1.39
PDZRN4-203ENST00000539469 ERICH1Q86X53 443 aa6.36□□□□□ -1.39
PDZRN4-203ENST00000539469 WHAMMQ8TF30 809 aa6.36□□□□□ -1.39
PDZRN4-203ENST00000539469 NOX5Q96PH1 765 aa6.36□□□□□ -1.39
PDZRN4-203ENST00000539469 PCDHB18PQ96TA0 734 aa6.36□□□□□ -1.39
PDZRN4-203ENST00000539469 TSGA10Q9BZW7 698 aa6.36□□□□□ -1.39
PDZRN4-203ENST00000539469 NUCKS1Q9H1E3 243 aaKnown RBP6.36□□□□□ -1.39
PDZRN4-203ENST00000539469 GDF3Q9NR23 364 aa6.36□□□□□ -1.39
PDZRN4-203ENST00000539469 CISHQ9NSE2 258 aa6.36□□□□□ -1.39
PDZRN4-203ENST00000539469 ABCF3Q9NUQ8 709 aa6.36□□□□□ -1.39
PDZRN4-203ENST00000539469 TAS2R14Q9NYV8 317 aa6.36□□□□□ -1.39
PDZRN4-203ENST00000539469 AMACRQ9UHK6 382 aa6.36□□□□□ -1.39
PDZRN4-203ENST00000539469 CNTN6Q9UQ52 1028 aa6.36□□□□□ -1.39
PDZRN4-203ENST00000539469 PCDHGB6Q9Y5F9 930 aa6.36□□□□□ -1.39
PDZRN4-203ENST00000539469 SSU72P8A0A1W2PR75 194 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 SYNDIG1LA6NDD5 238 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 MGRN1O60291 552 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 MMEP08473 750 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 TFE3P19532 575 aaPredicted RBP6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 LRPAP1P30533 357 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 GSTT1P30711 240 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 STT3AP46977 705 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 NRLP54845 237 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 RBP5P82980 135 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 FMO1Q01740 532 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 RNASELQ05823 741 aaKnown RBP6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 GRIK3Q13003 919 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 GLE1Q53GS7 698 aaKnown RBP6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 ZNF667Q5HYK9 610 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 TMEM270Q6UE05 265 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 CD300LGQ6UXG3 332 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 OTOP3Q7RTS5 596 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 TMCO2Q7Z6W1 182 aaPredicted RBP6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 RBBP8NLQ8NC74 664 aaPredicted RBP6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 SLC30A5Q8TAD4 765 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 MYO19Q96H55 970 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 MRPL45Q9BRJ2 306 aaKnown RBP6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 SPATA9Q9BWV2 254 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 IMPG2Q9BZV3 1241 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 SLC12A6Q9UHW9 1150 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 C15orf41Q9Y2V0 281 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 PCDHB4Q9Y5E5 795 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 ATXN2Q99700 1313 aaKnown RBP6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 TNRC18O15417 2968 aaPredicted RBP6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 PTPRDP23468 1912 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 A6NNZ2 444 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 FOXO6A8MYZ6 492 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 INPPL1O15357 1258 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 DDHD2O94830 711 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 ITGB1P05556 798 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 THP07101 528 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 CSF2RAP15509 400 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 CYP11B1P15538 503 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 CYP3A5P20815 502 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 TBXAS1P24557 533 aaPredicted RBP6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 ATICP31939 592 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 XRCC4Q13426 336 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 TAF11Q15544 211 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 TRIP4Q15650 581 aaPredicted RBP6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 C11orf91Q3C1V1 193 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 UBAP2Q5T6F2 1119 aaKnown RBP6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 ENOSF1Q7L5Y1 443 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 ZNF280BQ86YH2 543 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 CCDC50Q8IVM0 306 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 SYNPOQ8N3V7 929 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 ARFGAP2Q8N6H7 521 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 KBTBD7Q8WVZ9 684 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 SEPT8Q92599 483 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 TAF4BQ92750 862 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 AGPAT1Q99943 283 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 LPIN3Q9BQK8 851 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 FTHL17Q9BXU8 183 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 ELOVL4Q9GZR5 314 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 RETREG1Q9H6L5 497 aa6.35□□□□□ -1.39
PDZRN4-203ENST00000539469 KIAA0355O15063 1070 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 TIMP1P01033 207 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 SETSIPP0DME0 302 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 CHN1P15882 459 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 ODF1Q14990 250 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 SLC18A3Q16572 532 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 CCDC142Q17RM4 750 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 SOWAHAQ2M3V2 549 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 PAN2Q504Q3 1202 aaKnown RBP6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 FAM47EQ6ZV65 393 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 LRRC34Q8IZ02 419 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 LRRC52Q8N7C0 313 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 CCDC197Q8NCU1 140 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 HASPINQ8TF76 798 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 TFAP2BQ92481 460 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 APBB2Q92870 758 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 PRMT1Q99873 361 aaKnown RBP6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 PIDD1Q9HB75 910 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 ZNF69Q9UC07 566 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 DNAJB4Q9UDY4 337 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 PCDHB5Q9Y5E4 795 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 SNX9Q9Y5X1 595 aa6.34□□□□□ -1.39
PDZRN4-203ENST00000539469 PATJQ8NI35 1801 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms