RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 IMPG2Q9BZV3 1241 aa19.18■□□□□ 0.66
SFSWAP-207ENST00000538548 STYXL1Q9Y6J8 313 aa19.18■□□□□ 0.66
SFSWAP-207ENST00000538548 H3BSA7 217 aa19.18■□□□□ 0.66
SFSWAP-207ENST00000538548 ABCD1P33897 745 aa19.18■□□□□ 0.66
SFSWAP-207ENST00000538548 GK3PQ14409 553 aa19.18■□□□□ 0.66
SFSWAP-207ENST00000538548 ZFP1Q6P2D0 407 aa19.18■□□□□ 0.66
SFSWAP-207ENST00000538548 PHTF2Q8N3S3 785 aa19.18■□□□□ 0.66
SFSWAP-207ENST00000538548 ZBTB8BQ8NAP8 495 aaPredicted RBP19.18■□□□□ 0.66
SFSWAP-207ENST00000538548 GSDMBQ8TAX9 411 aa19.18■□□□□ 0.66
SFSWAP-207ENST00000538548 GNEQ9Y223 722 aaKnown RBP19.18■□□□□ 0.66
SFSWAP-207ENST00000538548 ZNF195O14628 629 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 NPR1P16066 1061 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 GRK2P25098 689 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 CNTFP26441 200 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 KRT76Q01546 638 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 CNTN2Q02246 1040 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 CBX3Q13185 183 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 FSCBQ5H9T9 825 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 ERI1Q8IV48 349 aaKnown RBP19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 SNRNP27Q8WVK2 155 aaKnown RBP19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 SORT1Q99523 831 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 PNPOQ9NVS9 261 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 PCSK1NQ9UHG2 260 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 RIMS3Q9UJD0 308 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 EMCNQ9ULC0 261 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 PRPF19Q9UMS4 504 aaKnown RBP19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 PCDHGC3Q9UN70 934 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 G3V3G9 751 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 PLA2G6O60733 806 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 KCNA4P22459 653 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 POLR2BP30876 1174 aaKnown RBP19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 DCAF8Q5TAQ9 597 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 PAOXQ6QHF9 649 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 NPNTQ6UXI9 565 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 FAM160B2Q86V87 743 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 MCPH1Q8NEM0 835 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 OR5B17Q8NGF7 314 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 SERPINI1Q99574 410 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 CYP26B1Q9NR63 512 aa19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 RSL24D1Q9UHA3 163 aaKnown RBP19.17■□□□□ 0.66
SFSWAP-207ENST00000538548 MAGEB3O15480 346 aa19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 DCXO43602 365 aa19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 ZMPSTE24O75844 475 aa19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 MAGEA6P43360 314 aa19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 MAGEA10P43363 369 aaPredicted RBP19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 N4BP2L1Q5TBK1 243 aaPredicted RBP19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 TRMT10BQ6PF06 316 aaKnown RBP19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 CROCCP3Q8IVE0 287 aa19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 ACMSDQ8TDX5 336 aa19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 HSPH1Q92598 858 aa19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 KLC2Q9H0B6 622 aa19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 MYOCOSA0A1B0GUC4 107 aa19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 E9PBE3 544 aa19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 H7C0C1 242 aa19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 GLRA3O75311 464 aa19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 ATP5OP48047 213 aa19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 C16orf46Q6P387 395 aa19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 BBS5Q8N3I7 341 aa19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 ARID2Q68CP9 1835 aa19.16■□□□□ 0.66
SFSWAP-207ENST00000538548 PLIN3O60664 434 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 TAF5Q15542 800 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 PTPN20Q4JDL3 420 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 ZNF394Q53GI3 561 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 C6orf52Q5T4I8 152 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 VWA5B1Q5TIE3 1220 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 LRRC8BQ6P9F7 803 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 RTP4Q96DX8 246 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 HSPBAP1Q96EW2 488 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 TRIM56Q9BRZ2 755 aaKnown RBP19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 HAUS8Q9BT25 410 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 SDCBP2Q9H190 292 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 TMEM165Q9HC07 324 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 FAIMQ9NVQ4 179 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 CCPG1Q9ULG6 757 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 TMEM221A6NGB7 291 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 DGAT1O75907 488 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 ASS1P00966 412 aaKnown RBP19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 APRTP07741 180 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 MIPP30301 263 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 CD97P48960 835 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 PCLAFQ15004 111 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 MCUQ8NE86 351 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 DEPDC1BQ8WUY9 529 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 MASTLQ96GX5 879 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 PCDH18Q9HCL0 1135 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 BCAP29Q9UHQ4 241 aa19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 HERC5Q9UII4 1024 aaKnown RBP19.15■□□□□ 0.66
SFSWAP-207ENST00000538548 NFIBO00712 420 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 MRPS22P82650 360 aaKnown RBP19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 PLOD1Q02809 727 aaPredicted RBP19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 KLF10Q13118 480 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 TFDP2Q14188 446 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 FLOT2Q14254 428 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 C1QTNF12Q5T7M4 302 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 ATG14Q6ZNE5 492 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 AMIGO2Q86SJ2 522 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 TFAP2BQ92481 460 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 ATP2A3Q93084 1043 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 CSRNP1Q96S65 589 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 SLC2A11Q9BYW1 496 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms