RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 TTC13Q8NBP0 860 aa10.5□□□□□ -0.73
LDHA-216ENST00000538451 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.5□□□□□ -0.73
LDHA-216ENST00000538451 PPM1EQ8WY54 764 aa10.5□□□□□ -0.73
LDHA-216ENST00000538451 NDRG1Q92597 394 aaKnown RBP10.5□□□□□ -0.73
LDHA-216ENST00000538451 HSPH1Q92598 858 aa10.5□□□□□ -0.73
LDHA-216ENST00000538451 NTAN1Q96AB6 310 aa10.5□□□□□ -0.73
LDHA-216ENST00000538451 RUNDC3BQ96NL0 473 aa10.5□□□□□ -0.73
LDHA-216ENST00000538451 PSMB7Q99436 277 aa10.5□□□□□ -0.73
LDHA-216ENST00000538451 L2HGDHQ9H9P8 463 aa10.5□□□□□ -0.73
LDHA-216ENST00000538451 PIDD1Q9HB75 910 aa10.5□□□□□ -0.73
LDHA-216ENST00000538451 MAN1C1Q9NR34 630 aa10.5□□□□□ -0.73
LDHA-216ENST00000538451 COX16Q9P0S2 106 aa10.5□□□□□ -0.73
LDHA-216ENST00000538451 STIM2Q9P246 746 aa10.5□□□□□ -0.73
LDHA-216ENST00000538451 RCOR3Q9P2K3 495 aaPredicted RBP10.5□□□□□ -0.73
LDHA-216ENST00000538451 FEZ2Q9UHY8 353 aaPredicted RBP10.5□□□□□ -0.73
LDHA-216ENST00000538451 DNMT3LQ9UJW3 386 aa10.5□□□□□ -0.73
LDHA-216ENST00000538451 TTC7AQ9ULT0 858 aaPredicted RBP10.5□□□□□ -0.73
LDHA-216ENST00000538451 TLR6Q9Y2C9 796 aa10.5□□□□□ -0.73
LDHA-216ENST00000538451 PLXNA4Q9HCM2 1894 aa10.5□□□□□ -0.73
LDHA-216ENST00000538451 EPOPA6NHQ4 379 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 ZNF487B1APH4 448 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 CCDC188H7C350 402 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 RFXAPO00287 272 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 DDX3YO15523 660 aaKnown RBP10.49□□□□□ -0.73
LDHA-216ENST00000538451 DAPK3O43293 454 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 ZNF189O75820 626 aaPredicted RBP10.49□□□□□ -0.73
LDHA-216ENST00000538451 SLU7O95391 586 aaKnown RBP10.49□□□□□ -0.73
LDHA-216ENST00000538451 ZDHHC11BP0C7U3 371 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 SPATA31D3P0C874 917 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 HTR7P34969 479 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 HARS2P49590 506 aaKnown RBP10.49□□□□□ -0.73
LDHA-216ENST00000538451 HDAC4P56524 1084 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 TBX4P57082 545 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 USP46P62068 366 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 AMPD2Q01433 879 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 SLC25A11Q02978 314 aaKnown RBP10.49□□□□□ -0.73
LDHA-216ENST00000538451 RING1Q06587 406 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 ZNF252P-AS1Q0IIN9 211 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 MTMR3Q13615 1198 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 PPP2R5DQ14738 602 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 CCDC85BQ15834 202 aaPredicted RBP10.49□□□□□ -0.73
LDHA-216ENST00000538451 DUSP6Q16828 381 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 NUGGCQ68CJ6 796 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 SPATA31D4Q6ZUB0 917 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 HFE2Q6ZVN8 426 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 PDZD4Q76G19 769 aaPredicted RBP10.49□□□□□ -0.73
LDHA-216ENST00000538451 BZW1Q7L1Q6 419 aaKnown RBP10.49□□□□□ -0.73
LDHA-216ENST00000538451 DQX1Q8TE96 717 aaKnown RBP10.49□□□□□ -0.73
LDHA-216ENST00000538451 CAPZA3Q96KX2 299 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 DDX50Q9BQ39 737 aaKnown RBP10.49□□□□□ -0.73
LDHA-216ENST00000538451 CALN1Q9BXU9 219 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 NSUN3Q9H649 340 aaKnown RBP10.49□□□□□ -0.73
LDHA-216ENST00000538451 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.49□□□□□ -0.73
LDHA-216ENST00000538451 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.49□□□□□ -0.73
LDHA-216ENST00000538451 MARCH2Q9P0N8 246 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 RASAL2Q9UJF2 1139 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 AP4E1Q9UPM8 1137 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 HBS1LQ9Y450 684 aaKnown RBP10.49□□□□□ -0.73
LDHA-216ENST00000538451 MTCH2Q9Y6C9 303 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 PATJQ8NI35 1801 aa10.49□□□□□ -0.73
LDHA-216ENST00000538451 COL6A3P12111 3177 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 ZNF840PA6NDX5 716 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 H3BRJ5 948 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 KRIT1O00522 736 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 IRAK2O43187 625 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 SRGAP2O75044 1071 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 FGGP02679 453 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 FYNP06241 537 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 RARAP10276 462 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 HMGA1P17096 107 aaKnown RBP10.48□□□□□ -0.73
LDHA-216ENST00000538451 KDELR1P24390 212 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 GABRR2P28476 465 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 PTPN7P35236 360 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 IRS1P35568 1242 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 NRIP1P48552 1158 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 SLC11A2P49281 568 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 CXCR3P49682 368 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 CDH6P55285 790 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 TAS2R40P59535 323 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 ITIH3Q06033 890 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 EFEMP1Q12805 493 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 CAMK1Q14012 370 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 TRIP4Q15650 581 aaPredicted RBP10.48□□□□□ -0.73
LDHA-216ENST00000538451 LRRC31Q6UY01 552 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 BHLHA9Q7RTU4 235 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 SCD5Q86SK9 330 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 RBM23Q86U06 439 aaKnown RBP10.48□□□□□ -0.73
LDHA-216ENST00000538451 FAM131BQ86XD5 332 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 DDX42Q86XP3 938 aaKnown RBP eCLIP10.48□□□□□ -0.73
LDHA-216ENST00000538451 RASGEF1CQ8N431 466 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 CMASQ8NFW8 434 aaPredicted RBP10.48□□□□□ -0.73
LDHA-216ENST00000538451 GDPD5Q8WTR4 605 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 SLC22A17Q8WUG5 538 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 KRT35Q92764 455 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 HAPLN3Q96S86 360 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 FERMT1Q9BQL6 677 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 CORO1BQ9BR76 489 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 ZNF670Q9BS34 389 aa10.48□□□□□ -0.73
LDHA-216ENST00000538451 FRMD8P1Q9BZ68 369 aaPredicted RBP10.48□□□□□ -0.73
LDHA-216ENST00000538451 OSBPL8Q9BZF1 889 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms