RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 ZBTB8OSQ8IWT0 167 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 CCDC33Q8N5R6 958 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 PPP1R14CQ8TAE6 165 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 SLC13A1Q9BZW2 595 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 KLHL4Q9C0H6 718 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 EBF3Q9H4W6 596 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 NRDE2Q9H7Z3 1164 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 MARCOQ9UEW3 520 aaPredicted RBP12.56□□□□□ -0.4
CPSF7-218ENST00000537641 CYB561D2O14569 222 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 CASQ2O14958 399 aaPredicted RBP12.55□□□□□ -0.4
CPSF7-218ENST00000537641 GAS2O43903 313 aaKnown RBP12.55□□□□□ -0.4
CPSF7-218ENST00000537641 PEX1O43933 1283 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 PRPSAP2O60256 369 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 RNASEH1O60930 286 aaKnown RBP12.55□□□□□ -0.4
CPSF7-218ENST00000537641 MAFO75444 373 aaPredicted RBP12.55□□□□□ -0.4
CPSF7-218ENST00000537641 IL18RAPO95256 599 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 PRKCBP05771 671 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 C6orf222P0C671 652 aaPredicted RBP12.55□□□□□ -0.4
CPSF7-218ENST00000537641 TGFB3P10600 412 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 RBL1P28749 1068 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 PDE1BQ01064 536 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 MED21Q13503 144 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 IER5Q5VY09 327 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 MBLAC2Q68D91 279 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 C1orf228Q6PIY5 440 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 ARHGAP22Q7Z5H3 698 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 PLD5Q8N7P1 536 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 GSTCDQ8NEC7 633 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 ACTRT2Q8TDY3 377 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 DEPDC1BQ8WUY9 529 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 SIGLEC10Q96LC7 697 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 NLRP4Q96MN2 994 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 BTBD9Q96Q07 612 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 TBCBQ99426 244 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 EBF4Q9BQW3 602 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 TCHPQ9BT92 498 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 C20orf27Q9GZN8 174 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 SPATC1LQ9H0A9 340 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 C2orf40Q9H1Z8 148 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 APOBEC2Q9Y235 224 aaKnown RBP12.55□□□□□ -0.4
CPSF7-218ENST00000537641 SF3B1O75533 1304 aaKnown RBP eCLIP12.55□□□□□ -0.47e-6■■■■■ 28.7
CPSF7-218ENST00000537641 MGAMO43451 1857 aa12.55□□□□□ -0.4
CPSF7-218ENST00000537641 HMX2A2RU54 273 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 SOWAHBA6NEL2 793 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 ARHGAP42A6NI28 874 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 C2CD4BA6NLJ0 364 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 MEI4A8MW99 385 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 AP1G1O43747 822 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 HMGCRP04035 888 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 SERPINE1P05121 402 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 VDRP11473 427 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 FGF3P11487 239 aaPredicted RBP12.54□□□□□ -0.4
CPSF7-218ENST00000537641 PROZP22891 400 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 RAP1GAPP47736 663 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 BCAR1P56945 870 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 LAMB3Q13751 1172 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 BOLA3Q53S33 107 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 TEDDM1Q5T9Z0 273 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 STEAP4Q687X5 459 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 MPZL3Q6UWV2 235 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 ZNF534Q76KX8 674 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 ADGRF2Q8IZF7 708 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 RXFP2Q8WXD0 754 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 PCYT2Q99447 389 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 DDX50Q9BQ39 737 aaKnown RBP12.54□□□□□ -0.4
CPSF7-218ENST00000537641 ZNF670Q9BS34 389 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 FAM124BQ9H5Z6 455 aaPredicted RBP12.54□□□□□ -0.4
CPSF7-218ENST00000537641 ZNF395Q9H8N7 513 aaPredicted RBP12.54□□□□□ -0.4
CPSF7-218ENST00000537641 CYP3A43Q9HB55 503 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 NXF1Q9UBU9 619 aaKnown RBP12.54□□□□□ -0.4
CPSF7-218ENST00000537641 DNAJC16Q9Y2G8 782 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 A0A0G2JLL6 359 aaPredicted RBP12.54□□□□□ -0.4
CPSF7-218ENST00000537641 TTLL13PA6NNM8 815 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 M0QYV0 167 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 UGT1A9O60656 530 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 CILPO75339 1184 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 GCATO75600 419 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 APRTP07741 180 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 ACAT1P24752 427 aaKnown RBP12.54□□□□□ -0.4
CPSF7-218ENST00000537641 GRK2P25098 689 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 GPD2P43304 727 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 SLC1A6P48664 564 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 STAT5BP51692 787 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 SLC25A3Q00325 362 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 DEUP1Q05D60 604 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 MSLNQ13421 630 aaPredicted RBP12.54□□□□□ -0.4
CPSF7-218ENST00000537641 LSAMPQ13449 338 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 CCNIQ14094 377 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 INSCQ1MX18 579 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 METTL7BQ6UX53 244 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 GADL1Q6ZQY3 521 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 PRRT2Q7Z6L0 340 aaPredicted RBP12.54□□□□□ -0.4
CPSF7-218ENST00000537641 PQLC3Q8N755 202 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 DRAXINQ8NBI3 349 aaPredicted RBP12.54□□□□□ -0.4
CPSF7-218ENST00000537641 PPP4R1Q8TF05 950 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 DCPSQ96C86 337 aaKnown RBP12.54□□□□□ -0.4
CPSF7-218ENST00000537641 CMTM5Q96DZ9 223 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 TMEM176AQ96HP8 235 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 FAM167AQ96KS9 214 aa12.54□□□□□ -0.4
CPSF7-218ENST00000537641 ZNF778Q96MU6 729 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms