RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 SMPD4Q9NXE4 827 aa25.23■■□□□ 1.63
HMGA2-208ENST00000537429 COX16Q9P0S2 106 aa25.23■■□□□ 1.63
HMGA2-208ENST00000537429 TMEM110-MUSTN1A8MSY1 372 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 CXCR3P49682 368 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 TBX4P57082 545 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 RING1Q06587 406 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 DAB2IPQ5VWQ8 1189 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 PTCRAQ6ISU1 281 aaPredicted RBP25.22■■□□□ 1.63
HMGA2-208ENST00000537429 DAAM2Q86T65 1068 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 CPNE8Q86YQ8 564 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 LRRC57Q8N9N7 239 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 USP13Q92995 863 aaPredicted RBP25.22■■□□□ 1.63
HMGA2-208ENST00000537429 ASB16Q96NS5 453 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 NCAPGQ9BPX3 1015 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 SMG9Q9H0W8 520 aaKnown RBP25.22■■□□□ 1.63
HMGA2-208ENST00000537429 GOLPH3Q9H4A6 298 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 ALG6Q9Y672 507 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 ZFP37Q9Y6Q3 630 aaPredicted RBP25.22■■□□□ 1.63
HMGA2-208ENST00000537429 NUP210Q8TEM1 1887 aaPredicted RBP25.22■■□□□ 1.63
HMGA2-208ENST00000537429 DOCK8Q8NF50 2099 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 PRAMEF12O95522 483 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 SP100P23497 879 aaPredicted RBP25.22■■□□□ 1.63
HMGA2-208ENST00000537429 PCK1P35558 622 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 SLC1A1P43005 524 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 CC2D1AQ6P1N0 951 aaPredicted RBP25.22■■□□□ 1.63
HMGA2-208ENST00000537429 SLFN11Q7Z7L1 901 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 C17orf53Q8N3J3 647 aaPredicted RBP25.22■■□□□ 1.63
HMGA2-208ENST00000537429 TTC16Q8NEE8 873 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 ADAMTS19Q8TE59 1207 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 FCRL2Q96LA5 508 aaPredicted RBP25.22■■□□□ 1.63
HMGA2-208ENST00000537429 IRX2Q9BZI1 471 aaPredicted RBP25.22■■□□□ 1.63
HMGA2-208ENST00000537429 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.22■■□□□ 1.635e-9■□□□□ 10.9
HMGA2-208ENST00000537429 FAM50BQ9Y247 325 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 CCL26Q9Y258 94 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 USTQ9Y2C2 406 aa25.22■■□□□ 1.63
HMGA2-208ENST00000537429 HELZP42694 1942 aaKnown RBP25.21■■□□□ 1.63
HMGA2-208ENST00000537429 PALMO75781 387 aa25.21■■□□□ 1.63
HMGA2-208ENST00000537429 STC2O76061 302 aa25.21■■□□□ 1.63
HMGA2-208ENST00000537429 HMBSP08397 361 aa25.21■■□□□ 1.63
HMGA2-208ENST00000537429 LAMP2P13473 410 aa25.21■■□□□ 1.63
HMGA2-208ENST00000537429 MIPP30301 263 aa25.21■■□□□ 1.63
HMGA2-208ENST00000537429 CCR1P32246 355 aa25.21■■□□□ 1.63
HMGA2-208ENST00000537429 SMAD2Q15796 467 aaKnown RBP25.21■■□□□ 1.63
HMGA2-208ENST00000537429 PUS10Q3MIT2 529 aaKnown RBP25.21■■□□□ 1.63
HMGA2-208ENST00000537429 ZC3H12AQ5D1E8 599 aaKnown RBP25.21■■□□□ 1.63
HMGA2-208ENST00000537429 FAM78AQ5JUQ0 283 aa25.21■■□□□ 1.63
HMGA2-208ENST00000537429 SND1Q7KZF4 910 aaKnown RBP eCLIP25.21■■□□□ 1.63
HMGA2-208ENST00000537429 FAM131BQ86XD5 332 aa25.21■■□□□ 1.63
HMGA2-208ENST00000537429 SMARCD2Q92925 531 aa25.21■■□□□ 1.63
HMGA2-208ENST00000537429 PLD4Q96BZ4 506 aa25.21■■□□□ 1.63
HMGA2-208ENST00000537429 WDCPQ9H6R7 721 aa25.21■■□□□ 1.63
HMGA2-208ENST00000537429 TRPV4Q9HBA0 871 aa25.21■■□□□ 1.63
HMGA2-208ENST00000537429 TCF3P15923 654 aa25.2■■□□□ 1.62
HMGA2-208ENST00000537429 COMTP21964 271 aa25.2■■□□□ 1.62
HMGA2-208ENST00000537429 KCNQ1P51787 676 aa25.2■■□□□ 1.62
HMGA2-208ENST00000537429 PPP2R5DQ14738 602 aa25.2■■□□□ 1.62
HMGA2-208ENST00000537429 BRMS1LQ5PSV4 323 aa25.2■■□□□ 1.62
HMGA2-208ENST00000537429 OTOP3Q7RTS5 596 aa25.2■■□□□ 1.62
HMGA2-208ENST00000537429 HYOU1Q9Y4L1 999 aa25.2■■□□□ 1.62
HMGA2-208ENST00000537429 LEFTY2O00292 366 aa25.19■■□□□ 1.62
HMGA2-208ENST00000537429 SLC2A3P11169 496 aa25.19■■□□□ 1.62
HMGA2-208ENST00000537429 SCYL2Q6P3W7 929 aa25.19■■□□□ 1.62
HMGA2-208ENST00000537429 SYCE1Q8N0S2 351 aa25.19■■□□□ 1.62
HMGA2-208ENST00000537429 SH3RF2Q8TEC5 729 aa25.19■■□□□ 1.62
HMGA2-208ENST00000537429 RNF34Q969K3 372 aa25.19■■□□□ 1.62
HMGA2-208ENST00000537429 WBP2Q969T9 261 aa25.19■■□□□ 1.62
HMGA2-208ENST00000537429 ACSF2Q96CM8 615 aaPredicted RBP25.19■■□□□ 1.62
HMGA2-208ENST00000537429 ARHGEF38Q9NXL2 777 aa25.19■■□□□ 1.62
HMGA2-208ENST00000537429 THEGQ9P2T0 379 aa25.19■■□□□ 1.62
HMGA2-208ENST00000537429 USP18Q9UMW8 372 aa25.19■■□□□ 1.62
HMGA2-208ENST00000537429 KCNU1A8MYU2 1149 aa25.18■■□□□ 1.62
HMGA2-208ENST00000537429 IRF1P10914 325 aa25.18■■□□□ 1.62
HMGA2-208ENST00000537429 TCF4P15884 667 aa25.18■■□□□ 1.62
HMGA2-208ENST00000537429 NUGGCQ68CJ6 796 aa25.18■■□□□ 1.62
HMGA2-208ENST00000537429 DDX42Q86XP3 938 aaKnown RBP eCLIP25.18■■□□□ 1.62
HMGA2-208ENST00000537429 UNC45BQ8IWX7 931 aa25.18■■□□□ 1.62
HMGA2-208ENST00000537429 CELF5Q8N6W0 485 aaKnown RBP25.18■■□□□ 1.62
HMGA2-208ENST00000537429 TRIM58Q8NG06 486 aa25.18■■□□□ 1.62
HMGA2-208ENST00000537429 RIN3Q8TB24 985 aa25.18■■□□□ 1.62
HMGA2-208ENST00000537429 PHF7Q9BWX1 381 aaPredicted RBP25.18■■□□□ 1.62
HMGA2-208ENST00000537429 TKTL2Q9H0I9 626 aa25.18■■□□□ 1.62
HMGA2-208ENST00000537429 KIF9Q9HAQ2 790 aa25.18■■□□□ 1.62
HMGA2-208ENST00000537429 ANLNQ9NQW6 1124 aa25.18■■□□□ 1.62
HMGA2-208ENST00000537429 EPS15L1Q9UBC2 864 aa25.18■■□□□ 1.62
HMGA2-208ENST00000537429 PCSK1NQ9UHG2 260 aa25.18■■□□□ 1.62
HMGA2-208ENST00000537429 I6L893 689 aaPredicted RBP25.17■■□□□ 1.62
HMGA2-208ENST00000537429 GREM1O60565 184 aa25.17■■□□□ 1.62
HMGA2-208ENST00000537429 KLKB1P03952 638 aa25.17■■□□□ 1.62
HMGA2-208ENST00000537429 FCARP24071 287 aa25.17■■□□□ 1.62
HMGA2-208ENST00000537429 IL1R2P27930 398 aa25.17■■□□□ 1.62
HMGA2-208ENST00000537429 TAS2R40P59535 323 aa25.17■■□□□ 1.62
HMGA2-208ENST00000537429 SLC25A11Q02978 314 aaKnown RBP25.17■■□□□ 1.62
HMGA2-208ENST00000537429 AAK1Q2M2I8 961 aa25.17■■□□□ 1.62
HMGA2-208ENST00000537429 CYP4V2Q6ZWL3 525 aaPredicted RBP25.17■■□□□ 1.62
HMGA2-208ENST00000537429 NTAN1Q96AB6 310 aa25.17■■□□□ 1.62
HMGA2-208ENST00000537429 PEBP4Q96S96 227 aa25.17■■□□□ 1.62
HMGA2-208ENST00000537429 CFAP97Q9P2B7 532 aa25.17■■□□□ 1.62
HMGA2-208ENST00000537429 UNC80Q8N2C7 3258 aa25.17■■□□□ 1.62
HMGA2-208ENST00000537429 SPOPO43791 374 aa25.17■■□□□ 1.62
HMGA2-208ENST00000537429 PRPSAP2O60256 369 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms