RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 TM9SF1O15321 606 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 STX11O75558 287 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 B3GAT3O94766 335 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 FBXO21O94952 628 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 FAM58BPP0C7Q3 252 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 PRLRP16471 622 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 CPT1AP50416 773 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 MAD2L1Q13257 205 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-209ENST00000537178 DDR2Q16832 855 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 AGKQ53H12 422 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 DGKKQ5KSL6 1271 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 ZNF618Q5T7W0 954 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 WDR93Q6P2C0 686 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 IKBIPQ70UQ0 350 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 MTSS1LQ765P7 747 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 KRT74Q7RTS7 529 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 MIB1Q86YT6 1006 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.92□□□□□ -0.66
CLIP1-209ENST00000537178 EPS8L3Q8TE67 593 aaKnown RBP10.92□□□□□ -0.66
CLIP1-209ENST00000537178 UTP15Q8TED0 518 aaKnown RBP10.92□□□□□ -0.66
CLIP1-209ENST00000537178 FAM151AQ8WW52 585 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 FBXO32Q969P5 355 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 LRRC39Q96DD0 335 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 ADGRE3Q9BY15 652 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 KCNH7Q9NS40 1196 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 CNOT7Q9UIV1 285 aaKnown RBP10.92□□□□□ -0.66
CLIP1-209ENST00000537178 TTLL13PA6NNM8 815 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 GLP2RO95838 553 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 CKMP06732 381 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 ERVK-10P10266 1014 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 RXRGP48443 463 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 GSTA3Q16772 222 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 PACS2Q86VP3 889 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 KYQ8NBH2 561 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 SETD9Q8NE22 299 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 EXD1Q8NHP7 514 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 TBC1D16Q8TBP0 767 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 CHORDC1Q9UHD1 332 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-209ENST00000537178 VPS51Q9UID3 782 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 DUSP12Q9UNI6 340 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 BCL9LQ86UU0 1499 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 NDUFB5O43674 189 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 ATG7O95352 703 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 PAICSP22234 425 aaKnown RBP10.92□□□□□ -0.66
CLIP1-209ENST00000537178 SCTRP47872 440 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 MGAT5Q09328 741 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 NFIXQ14938 502 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 CASP12Q6UXS9 341 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 IZUMO2Q6UXV1 221 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 C16orf86Q6ZW13 317 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 USP49Q70CQ1 688 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 TRPC4APQ8TEL6 797 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 KCTD14Q9BQ13 255 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-209ENST00000537178 MBD2Q9UBB5 411 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 PRR23AA6NEV1 266 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 NCAM2O15394 837 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 BAIAP3O94812 1187 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 SKIV2L2P42285 1042 aaKnown RBP10.92□□□□□ -0.66
CLIP1-209ENST00000537178 BCAT1P54687 386 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 KCNMA1Q12791 1236 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 ATAD3BQ5T9A4 648 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 GPRC5AQ8NFJ5 357 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 ACSF2Q96CM8 615 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-209ENST00000537178 DPY30Q9C005 99 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 SCUBE2Q9NQ36 999 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 PDGFCQ9NRA1 345 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 TRPM5Q9NZQ8 1165 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 IPPQ9Y573 584 aa10.92□□□□□ -0.66
CLIP1-209ENST00000537178 KLHL41O60662 606 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 ZBTB7AO95365 584 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 NOS3P29474 1203 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 NME5P56597 212 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 RHOAP61586 193 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 KCNT1Q5JUK3 1230 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 CDC73Q6P1J9 531 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 TMEM26Q6ZUK4 368 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 TMEM79Q9BSE2 394 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 STARD13Q9Y3M8 1113 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 DOCK2Q92608 1830 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 A0A087X0T9 212 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 MAGEB16A2A368 324 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 KPNA4O00629 521 aaPredicted RBP10.91□□□□□ -0.66
CLIP1-209ENST00000537178 HOXA2O43364 376 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 KLHL18O94889 574 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 FAM228BP0C875 321 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 MBL2P11226 248 aaPredicted RBP10.91□□□□□ -0.66
CLIP1-209ENST00000537178 CASP7P55210 303 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 FOXO4P98177 505 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 PRKAA1Q13131 559 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 LPCAT2Q7L5N7 544 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 SH3BP5LQ7L8J4 393 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 SPPL2AQ8TCT8 520 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 ATP8B4Q8TF62 1192 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 COQ7Q99807 217 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 ADI1Q9BV57 179 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 CD248Q9HCU0 757 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 FOXN3O00409 490 aaPredicted RBP10.91□□□□□ -0.66
CLIP1-209ENST00000537178 PEX1O43933 1283 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 FAM20BO75063 409 aa10.91□□□□□ -0.66
CLIP1-209ENST00000537178 IL12RB1P42701 662 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms