RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 KCNT2Q6UVM3 1135 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 ANKRD42Q8N9B4 389 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 RNF139Q8WU17 664 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 HTR3CQ8WXA8 447 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 PAFAH2Q99487 392 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 LPIN3Q9BQK8 851 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 NAT9Q9BTE0 207 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 RAB6CQ9H0N0 254 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 DTLQ9NZJ0 730 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 TRIP11Q15643 1979 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 DOCK3Q8IZD9 2030 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 A0A0A0MRY4 1105 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 M0QZQ0 153 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 SNX3O60493 162 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 ATP2C2O75185 946 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 GSTA1P08263 222 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 INHBAP08476 426 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 ACAT1P24752 427 aaKnown RBP14.04□□□□□ -0.16
SMG6-203ENST00000536871 SSTR1P30872 391 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 ELK3P41970 407 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 SEPT7Q16181 437 aaKnown RBP14.04□□□□□ -0.16
SMG6-203ENST00000536871 MSS51Q4VC12 460 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 RNF187Q5TA31 235 aaPredicted RBP14.04□□□□□ -0.16
SMG6-203ENST00000536871 DCLRE1AQ6PJP8 1040 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 FAM131BQ86XD5 332 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 CCDC185Q8N715 623 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 PCED1BQ96HM7 432 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 SPATA13Q96N96 652 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 TGS1Q96RS0 853 aaKnown RBP14.04□□□□□ -0.16
SMG6-203ENST00000536871 SEZ6LQ9BYH1 1024 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 C10orf88Q9H8K7 445 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 ARHGEF4Q9NR80 690 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 RNF19AQ9NV58 838 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 GABRQQ9UN88 632 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 UTRNP46939 3433 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 TCRBV7S3A2A0A539 114 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 MOXD2PA6NHM9 499 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 TCP11X1B4DZS4 312 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 EEF2KO00418 725 aaKnown RBP14.04□□□□□ -0.16
SMG6-203ENST00000536871 ASMTLO95671 621 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 EOMESO95936 686 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 LTFP02788 710 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 TFE3P19532 575 aaPredicted RBP14.04□□□□□ -0.16
SMG6-203ENST00000536871 HTR7P34969 479 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 ADRA1BP35368 520 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 MAGEA3P43357 314 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 TSPY1Q01534 308 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 PRKCZQ05513 592 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 PKN2Q16513 984 aaKnown RBP14.04□□□□□ -0.16
SMG6-203ENST00000536871 NUGGCQ68CJ6 796 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 FAM171BQ6P995 826 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 MGARPQ8TDB4 240 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 DENND1AQ8TEH3 1009 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 SLC44A1Q8WWI5 657 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 ULBP1Q9BZM6 244 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 CXorf56Q9H5V9 222 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 AGO3Q9H9G7 860 aaKnown RBP14.04□□□□□ -0.16
SMG6-203ENST00000536871 ETNK1Q9HBU6 452 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 DMAP1Q9NPF5 467 aaPredicted RBP14.04□□□□□ -0.16
SMG6-203ENST00000536871 CHMP2BQ9UQN3 213 aa14.04□□□□□ -0.16
SMG6-203ENST00000536871 USP15Q9Y4E8 981 aaPredicted RBP14.04□□□□□ -0.16
SMG6-203ENST00000536871 TMEM88BA6NKF7 163 aa14.03□□□□□ -0.16
SMG6-203ENST00000536871 CLDN5O00501 218 aa14.03□□□□□ -0.16
SMG6-203ENST00000536871 KRT37O76014 449 aa14.03□□□□□ -0.16
SMG6-203ENST00000536871 GNRH1P01148 92 aa14.03□□□□□ -0.16
SMG6-203ENST00000536871 APRTP07741 180 aa14.03□□□□□ -0.16
SMG6-203ENST00000536871 GOT1P17174 413 aa14.03□□□□□ -0.16
SMG6-203ENST00000536871 MX2P20592 715 aa14.03□□□□□ -0.16
SMG6-203ENST00000536871 CA4P22748 312 aa14.03□□□□□ -0.16
SMG6-203ENST00000536871 CD52P31358 61 aa14.03□□□□□ -0.16
SMG6-203ENST00000536871 SERPINB6P35237 376 aa14.03□□□□□ -0.16
SMG6-203ENST00000536871 YWHAGP61981 247 aaKnown RBP eCLIP14.03□□□□□ -0.16
SMG6-203ENST00000536871 GBE1Q04446 702 aa14.03□□□□□ -0.16
SMG6-203ENST00000536871 ITGA7Q13683 1181 aa14.03□□□□□ -0.16
SMG6-203ENST00000536871 PRKD1Q15139 912 aaPredicted RBP14.03□□□□□ -0.16
SMG6-203ENST00000536871 TIGD5Q53EQ6 642 aa14.03□□□□□ -0.16
SMG6-203ENST00000536871 PM20D1Q6GTS8 502 aa14.03□□□□□ -0.16
SMG6-203ENST00000536871 SLC26A11Q86WA9 606 aa14.03□□□□□ -0.16
SMG6-203ENST00000536871 MTBPQ96DY7 904 aa14.03□□□□□ -0.16
SMG6-203ENST00000536871 SMOQ99835 787 aa14.03□□□□□ -0.16
SMG6-203ENST00000536871 TSEN34Q9BSV6 310 aaKnown RBP14.03□□□□□ -0.16
SMG6-203ENST00000536871 ZC3H7BQ9UGR2 993 aaKnown RBP14.03□□□□□ -0.16
SMG6-203ENST00000536871 CASP8AP2Q9UKL3 1982 aa14.03□□□□□ -0.16
SMG6-203ENST00000536871 TCRBV9S1A1TA0A576 114 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 CCT8L1PA6NM43 557 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 KBTBD13C9JR72 458 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 TYROBPO43914 113 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 B3GAT3O94766 335 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 COL6A1P12109 1028 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 PRKAR2AP13861 404 aaKnown RBP14.02□□□□□ -0.16
SMG6-203ENST00000536871 CREB1P16220 341 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 AMPD1P23109 780 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 PRKCHP24723 683 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 CNTFP26441 200 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 SERPINB9P50453 376 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 SP3Q02447 781 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 ZNF33AQ06730 810 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 NAB1Q13506 487 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 LPIN1Q14693 890 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 PDK4Q16654 411 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms