RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 AGBL3Q8NEM8 1001 aa6.48□□□□□ -1.37
CLIP1-207ENST00000536634 OR6B3Q8NGW1 331 aa6.48□□□□□ -1.37
CLIP1-207ENST00000536634 NTN5Q8WTR8 489 aaPredicted RBP6.48□□□□□ -1.37
CLIP1-207ENST00000536634 EYA3Q99504 573 aa6.48□□□□□ -1.37
CLIP1-207ENST00000536634 FAM204AQ9H8W3 233 aa6.48□□□□□ -1.37
CLIP1-207ENST00000536634 SEMA4GQ9NTN9 838 aa6.48□□□□□ -1.37
CLIP1-207ENST00000536634 SLC17A6Q9P2U8 582 aa6.48□□□□□ -1.37
CLIP1-207ENST00000536634 MRPS17Q9Y2R5 130 aaKnown RBP6.48□□□□□ -1.37
CLIP1-207ENST00000536634 PPFIA2O75334 1257 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 URI1O94763 535 aaPredicted RBP6.47□□□□□ -1.37
CLIP1-207ENST00000536634 UFL1O94874 794 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 IGLV2-14P01704 120 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 ITPKBP27987 946 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 CLCN2P51788 898 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 AIMP1Q12904 312 aaKnown RBP6.47□□□□□ -1.37
CLIP1-207ENST00000536634 SLC13A2Q13183 592 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 GFOD2Q3B7J2 385 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 TSTD2Q5T7W7 516 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 LMBRD2Q68DH5 695 aaPredicted RBP6.47□□□□□ -1.37
CLIP1-207ENST00000536634 COPS6Q7L5N1 327 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 WDR75Q8IWA0 830 aaKnown RBP6.47□□□□□ -1.37
CLIP1-207ENST00000536634 CLMNQ96JQ2 1002 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 MOGAT1Q96PD6 335 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 NELL2Q99435 816 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 MESP1Q9BRJ9 268 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 ALG8Q9BVK2 526 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 PRO3102Q9H379 93 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 OBP2AQ9NY56 170 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 EHD3Q9NZN3 535 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 CPNE7Q9UBL6 633 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 NDRG4Q9ULP0 352 aaKnown RBP6.47□□□□□ -1.37
CLIP1-207ENST00000536634 ENTPD2Q9Y5L3 495 aa6.47□□□□□ -1.37
CLIP1-207ENST00000536634 OTOFQ9HC10 1997 aa6.46□□□□□ -1.37
CLIP1-207ENST00000536634 LRRC3CA6NJW4 275 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 MYO1CO00159 1063 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 TPP1O14773 563 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 ORC4O43929 436 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 JUPP14923 745 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 ZFXP17010 805 aaPredicted RBP6.46□□□□□ -1.38
CLIP1-207ENST00000536634 LIPAP38571 399 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 GBX1Q14549 363 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 HSP90AB3PQ58FF7 597 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 AKNAD1Q5T1N1 836 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 SFRP4Q6FHJ7 346 aaPredicted RBP6.46□□□□□ -1.38
CLIP1-207ENST00000536634 CHST15Q7LFX5 561 aaPredicted RBP6.46□□□□□ -1.38
CLIP1-207ENST00000536634 DTX2Q86UW9 622 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 MPP5Q8N3R9 675 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 PNISRQ8TF01 805 aaKnown RBP6.46□□□□□ -1.38
CLIP1-207ENST00000536634 ATG4AQ8WYN0 398 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 ERO1AQ96HE7 468 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 UROC1Q96N76 676 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 BHMT2Q9H2M3 363 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 CPNE5Q9HCH3 593 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 SHOC2Q9UQ13 582 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 TBC1D30Q9Y2I9 924 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 COX11Q9Y6N1 276 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 SPEF2Q9C093 1822 aa6.46□□□□□ -1.38
CLIP1-207ENST00000536634 GOLGA6CA6NDK9 693 aa6.45□□□□□ -1.38
CLIP1-207ENST00000536634 GOLGA6BA6NDN3 693 aa6.45□□□□□ -1.38
CLIP1-207ENST00000536634 MANSC4A6NHS7 340 aaPredicted RBP6.45□□□□□ -1.38
CLIP1-207ENST00000536634 TBC1D4O60343 1298 aa6.45□□□□□ -1.38
CLIP1-207ENST00000536634 GOLGA6DP0CG33 693 aa6.45□□□□□ -1.38
CLIP1-207ENST00000536634 NF2P35240 595 aa6.45□□□□□ -1.38
CLIP1-207ENST00000536634 SUMO3P55854 103 aaPredicted RBP6.45□□□□□ -1.38
CLIP1-207ENST00000536634 WNT3P56703 355 aa6.45□□□□□ -1.38
CLIP1-207ENST00000536634 RPS8P62241 208 aaKnown RBP6.45□□□□□ -1.38
CLIP1-207ENST00000536634 MYO1EQ12965 1108 aa6.45□□□□□ -1.38
CLIP1-207ENST00000536634 DCAF12L1Q5VU92 463 aa6.45□□□□□ -1.38
CLIP1-207ENST00000536634 CCDC149Q6ZUS6 474 aa6.45□□□□□ -1.38
CLIP1-207ENST00000536634 ARMC9Q7Z3E5 817 aa6.45□□□□□ -1.38
CLIP1-207ENST00000536634 GRASPQ7Z6J2 395 aaPredicted RBP6.45□□□□□ -1.38
CLIP1-207ENST00000536634 ZNF764Q96H86 408 aaPredicted RBP6.45□□□□□ -1.38
CLIP1-207ENST00000536634 CFAP53Q96M91 514 aa6.45□□□□□ -1.38
CLIP1-207ENST00000536634 TIMP4Q99727 224 aa6.45□□□□□ -1.38
CLIP1-207ENST00000536634 ISCA1Q9BUE6 129 aa6.45□□□□□ -1.38
CLIP1-207ENST00000536634 MS4A7Q9GZW8 240 aaPredicted RBP6.45□□□□□ -1.38
CLIP1-207ENST00000536634 CXorf36Q9H7Y0 433 aa6.45□□□□□ -1.38
CLIP1-207ENST00000536634 METTL14Q9HCE5 456 aaKnown RBP6.45□□□□□ -1.38
CLIP1-207ENST00000536634 GOLGA6AQ9NYA3 693 aa6.45□□□□□ -1.38
CLIP1-207ENST00000536634 TSPYL4Q9UJ04 414 aa6.45□□□□□ -1.38
CLIP1-207ENST00000536634 ADAM21Q9UKJ8 722 aa6.45□□□□□ -1.38
CLIP1-207ENST00000536634 NUDCQ9Y266 331 aa6.45□□□□□ -1.38
CLIP1-207ENST00000536634 FRMPD2Q68DX3 1309 aaPredicted RBP6.45□□□□□ -1.38
CLIP1-207ENST00000536634 FRS3O43559 492 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 ZBED1O96006 694 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 CSF1RP07333 972 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 EBLN1P0CF75 366 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 CYP2C9P11712 490 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 PPP2R1AP30153 589 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 SP3Q02447 781 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 BMPR2Q13873 1038 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 KRT24Q2M2I5 525 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 SLC4A8Q2Y0W8 1093 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 SLC9C1Q4G0N8 1177 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 TREML2Q5T2D2 321 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 RNF220Q5VTB9 566 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 AMIGO2Q86SJ2 522 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 MICU3Q86XE3 530 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 ZNF575Q86XF7 245 aa6.44□□□□□ -1.38
CLIP1-207ENST00000536634 GAS2L3Q86XJ1 694 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms