RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 MYO18AQ92614 2054 aaKnown RBP13.73□□□□□ -0.21
RTN3-207ENST00000536011 TRIM49BA6NDI0 452 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 PRRT4C9JH25 899 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 P4HA2O15460 535 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 KLKB1P03952 638 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 CISD3P0C7P0 127 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 NDUFV2P19404 249 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 PTGER3P43115 390 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 FMO5P49326 533 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 NOVA1P51513 510 aaKnown RBP13.73□□□□□ -0.21
RTN3-207ENST00000536011 PMS1P54277 932 aaKnown RBP13.73□□□□□ -0.21
RTN3-207ENST00000536011 MFAP3P55082 362 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 ADIGQ0VDE8 80 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 FYB2Q5VWT5 728 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 PEAR1Q5VY43 1037 aaPredicted RBP13.73□□□□□ -0.21
RTN3-207ENST00000536011 PSAPL1Q6NUJ1 521 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 DENND1CQ8IV53 801 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 DDI1Q8WTU0 396 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 KCTD13Q8WZ19 329 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 GOLGA1Q92805 767 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 CNGB3Q9NQW8 809 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 ABCC13Q9NSE7 274 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 CACNA2D2Q9NY47 1150 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 PILRBQ9UKJ0 227 aa13.73□□□□□ -0.21
RTN3-207ENST00000536011 CEP295Q9C0D2 2601 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 PATE3B3GLJ2 98 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 O00370 1275 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 TIMM44O43615 452 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 SYNCRIPO60506 623 aaKnown RBP13.72□□□□□ -0.21
RTN3-207ENST00000536011 NDUFS2O75306 463 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 LATS1O95835 1130 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 GNA14O95837 355 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 CFIP05156 583 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 CSRP1P21291 193 aaKnown RBP13.72□□□□□ -0.21
RTN3-207ENST00000536011 PMLP29590 882 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 ATXN3P54252 364 aaPredicted RBP13.72□□□□□ -0.21
RTN3-207ENST00000536011 IRX4P78413 519 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 SHC2P98077 582 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 ARID5AQ03989 594 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 LRMPQ12912 555 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 DUOXA1Q1HG43 343 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 MPPE1Q53F39 396 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 SYCP2LQ5T4T6 812 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 N4BP2L1Q5TBK1 243 aaPredicted RBP13.72□□□□□ -0.21
RTN3-207ENST00000536011 SLC23A3Q6PIS1 610 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 TMEM270Q6UE05 265 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 LCLAT1Q6UWP7 414 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 KIAA1324Q6UXG2 1013 aaKnown RBP13.72□□□□□ -0.21
RTN3-207ENST00000536011 FMNL3Q8IVF7 1028 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 FAM217AQ8IXS0 508 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 SCML4Q8N228 414 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 PPM1KQ8N3J5 372 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 FOXJ1Q92949 421 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 ACOX2Q99424 681 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 HCN2Q9UL51 889 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 CYP8B1Q9UNU6 501 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 PCDHB4Q9Y5E5 795 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 STON1Q9Y6Q2 735 aa13.72□□□□□ -0.21
RTN3-207ENST00000536011 IGHV1OR15-9A0A0B4J2B8 117 aa13.71□□□□□ -0.21
RTN3-207ENST00000536011 CEACAM1P13688 526 aa13.71□□□□□ -0.21
RTN3-207ENST00000536011 ITPKAP23677 461 aa13.71□□□□□ -0.21
RTN3-207ENST00000536011 GFPT1Q06210 699 aaPredicted RBP13.71□□□□□ -0.21
RTN3-207ENST00000536011 ZNF33AQ06730 810 aa13.71□□□□□ -0.21
RTN3-207ENST00000536011 TRIP4Q15650 581 aaPredicted RBP13.71□□□□□ -0.21
RTN3-207ENST00000536011 BSPRYQ5W0U4 402 aa13.71□□□□□ -0.21
RTN3-207ENST00000536011 KLHL10Q6JEL2 608 aa13.71□□□□□ -0.21
RTN3-207ENST00000536011 KIAA1211LQ6NV74 962 aa13.71□□□□□ -0.21
RTN3-207ENST00000536011 UBR7Q8N806 425 aa13.71□□□□□ -0.21
RTN3-207ENST00000536011 FRMD1Q8N878 549 aa13.71□□□□□ -0.21
RTN3-207ENST00000536011 ZNF557Q8N988 423 aaPredicted RBP13.71□□□□□ -0.21
RTN3-207ENST00000536011 IRGQQ8WZA9 623 aa13.71□□□□□ -0.21
RTN3-207ENST00000536011 ERCC4Q92889 916 aaPredicted RBP13.71□□□□□ -0.21
RTN3-207ENST00000536011 MRGPRX1Q96LB2 322 aa13.71□□□□□ -0.21
RTN3-207ENST00000536011 IRX2Q9BZI1 471 aaPredicted RBP13.71□□□□□ -0.21
RTN3-207ENST00000536011 SLC32A1Q9H598 525 aa13.71□□□□□ -0.21
RTN3-207ENST00000536011 CD248Q9HCU0 757 aa13.71□□□□□ -0.21
RTN3-207ENST00000536011 THAP10Q9P2Z0 257 aaPredicted RBP13.71□□□□□ -0.21
RTN3-207ENST00000536011 SUSD2Q9UGT4 822 aa13.71□□□□□ -0.21
RTN3-207ENST00000536011 MAN1B1Q9UKM7 699 aa13.71□□□□□ -0.21
RTN3-207ENST00000536011 SLC6A14Q9UN76 642 aa13.71□□□□□ -0.21
RTN3-207ENST00000536011 RAD54BQ9Y620 910 aa13.71□□□□□ -0.21
RTN3-207ENST00000536011 TNRC6BQ9UPQ9 1833 aaKnown RBP13.71□□□□□ -0.22
RTN3-207ENST00000536011 CACNA1BQ00975 2339 aa13.7□□□□□ -0.22
RTN3-207ENST00000536011 ATXN2Q99700 1313 aaKnown RBP13.7□□□□□ -0.22
RTN3-207ENST00000536011 M0QYV0 167 aa13.7□□□□□ -0.22
RTN3-207ENST00000536011 TULP2O00295 520 aa13.7□□□□□ -0.22
RTN3-207ENST00000536011 CDX4O14627 284 aaPredicted RBP13.7□□□□□ -0.22
RTN3-207ENST00000536011 SART1O43290 800 aaKnown RBP13.7□□□□□ -0.22
RTN3-207ENST00000536011 FBXO21O94952 628 aa13.7□□□□□ -0.22
RTN3-207ENST00000536011 FGFR1OPO95684 399 aaKnown RBP13.7□□□□□ -0.22
RTN3-207ENST00000536011 SERPINF2P08697 491 aa13.7□□□□□ -0.22
RTN3-207ENST00000536011 GNSP15586 552 aa13.7□□□□□ -0.22
RTN3-207ENST00000536011 ENGP17813 658 aa13.7□□□□□ -0.22
RTN3-207ENST00000536011 MAPK8P45983 427 aa13.7□□□□□ -0.22
RTN3-207ENST00000536011 GCNT1Q02742 428 aa13.7□□□□□ -0.22
RTN3-207ENST00000536011 ZNF252P-AS1Q0IIN9 211 aa13.7□□□□□ -0.22
RTN3-207ENST00000536011 CNGA2Q16280 664 aa13.7□□□□□ -0.22
RTN3-207ENST00000536011 GEN1Q17RS7 908 aa13.7□□□□□ -0.22
RTN3-207ENST00000536011 UAP1L1Q3KQV9 507 aa13.7□□□□□ -0.22
RTN3-207ENST00000536011 WDR45BQ5MNZ6 344 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms