RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 SDC4P31431 198 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 NOS2P35228 1153 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 RFC1P35251 1148 aaPredicted RBP11.25□□□□□ -0.61
UBE3B-205ENST00000535900 PCK1P35558 622 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 ID4P47928 161 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 DDR2Q16832 855 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 C2CD6Q53TS8 623 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 PRSS36Q5K4E3 855 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 LRRC38Q5VT99 294 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 PEX26Q7Z412 305 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 DNAAF5Q86Y56 855 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 LEMD2Q8NC56 503 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 ATRIPQ8WXE1 791 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 ZNF592Q92610 1267 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 DNASE1L2Q92874 299 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 ELSPBP1Q96BH3 223 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 FAM149B1Q96BN6 582 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 ZNF512Q96ME7 567 aaPredicted RBP11.25□□□□□ -0.61
UBE3B-205ENST00000535900 SLC2A13Q96QE2 648 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 DDX23Q9BUQ8 820 aaKnown RBP11.25□□□□□ -0.61
UBE3B-205ENST00000535900 OSBPL6Q9BZF3 934 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 IRX2Q9BZI1 471 aaPredicted RBP11.25□□□□□ -0.61
UBE3B-205ENST00000535900 BRD9Q9H8M2 597 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 ZFP14Q9HCL3 533 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 METTL5Q9NRN9 209 aaKnown RBP11.25□□□□□ -0.61
UBE3B-205ENST00000535900 HEBP1Q9NRV9 189 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 ABCC13Q9NSE7 274 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 OLA1Q9NTK5 396 aaKnown RBP11.25□□□□□ -0.61
UBE3B-205ENST00000535900 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.25□□□□□ -0.61
UBE3B-205ENST00000535900 CLIC5Q9NZA1 410 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 RNF14Q9UBS8 474 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 TJP2Q9UDY2 1190 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 CDC23Q9UJX2 597 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 AMFRQ9UKV5 643 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 SLC27A5Q9Y2P5 690 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 MRPS17Q9Y2R5 130 aaKnown RBP11.25□□□□□ -0.61
UBE3B-205ENST00000535900 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.25□□□□□ -0.61
UBE3B-205ENST00000535900 CAPN6Q9Y6Q1 641 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 COL4A2P08572 1712 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 TICRRQ7Z2Z1 1910 aa11.25□□□□□ -0.61
UBE3B-205ENST00000535900 CCDC66A2RUB6 948 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 SLC38A8A6NNN8 435 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 NCAM2O15394 837 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 F9P00740 461 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 USP17L7P0C7H9 530 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 RALAP11233 206 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 PFKLP17858 780 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 TCP1P17987 556 aaKnown RBP11.24□□□□□ -0.61
UBE3B-205ENST00000535900 FCARP24071 287 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 PSMA2P25787 234 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 TARSP26639 723 aaKnown RBP11.24□□□□□ -0.61
UBE3B-205ENST00000535900 CCR2P41597 374 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 TUBP50607 506 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 RPL7AP62424 266 aaKnown RBP11.24□□□□□ -0.61
UBE3B-205ENST00000535900 MTA1Q13330 715 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 MESDQ14696 234 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 TAF12Q16514 161 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 HADHQ16836 314 aaKnown RBP11.24□□□□□ -0.61
UBE3B-205ENST00000535900 WHAMMP3Q1A5X7 153 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 SLC25A52Q3SY17 297 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 SNX30Q5VWJ9 437 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 TANGO2Q6ICL3 276 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 ZNF852Q6ZMS4 543 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 STRADAQ7RTN6 431 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 GPRIN1Q7Z2K8 1008 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 POLNQ7Z5Q5 900 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 NT5DC3Q86UY8 548 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 UBL4BQ8N7F7 174 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 CENPIQ92674 756 aaPredicted RBP11.24□□□□□ -0.61
UBE3B-205ENST00000535900 FBXO32Q969P5 355 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 NT5C3BQ969T7 300 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 PSMG2Q969U7 264 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 PGAP3Q96FM1 320 aaPredicted RBP11.24□□□□□ -0.61
UBE3B-205ENST00000535900 PLA2G2FQ9BZM2 168 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 CRISPLD1Q9H336 500 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 TLR8Q9NR97 1041 aaKnown RBP11.24□□□□□ -0.61
UBE3B-205ENST00000535900 ZMYM5Q9UJ78 669 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 NDRG2Q9UN36 371 aaKnown RBP11.24□□□□□ -0.61
UBE3B-205ENST00000535900 MTF2Q9Y483 593 aaPredicted RBP11.24□□□□□ -0.61
UBE3B-205ENST00000535900 ALG6Q9Y672 507 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 GREB1Q4ZG55 1949 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 FANCMQ8IYD8 2048 aa11.24□□□□□ -0.61
UBE3B-205ENST00000535900 ZFHX2Q9C0A1 2572 aaPredicted RBP11.23□□□□□ -0.61
UBE3B-205ENST00000535900 ZNF638Q14966 1978 aaKnown RBP11.23□□□□□ -0.61
UBE3B-205ENST00000535900 YJEFN3A6XGL0 299 aa11.23□□□□□ -0.61
UBE3B-205ENST00000535900 SOBPA7XYQ1 873 aa11.23□□□□□ -0.61
UBE3B-205ENST00000535900 E7ENQ6 273 aa11.23□□□□□ -0.61
UBE3B-205ENST00000535900 CAPN9O14815 690 aa11.23□□□□□ -0.61
UBE3B-205ENST00000535900 FANCGO15287 622 aa11.23□□□□□ -0.61
UBE3B-205ENST00000535900 PSTPIP1O43586 416 aa11.23□□□□□ -0.61
UBE3B-205ENST00000535900 SPOPO43791 374 aa11.23□□□□□ -0.61
UBE3B-205ENST00000535900 URI1O94763 535 aaPredicted RBP11.23□□□□□ -0.61
UBE3B-205ENST00000535900 KRT7P08729 469 aa11.23□□□□□ -0.61
UBE3B-205ENST00000535900 ZDHHC11BP0C7U3 371 aa11.23□□□□□ -0.61
UBE3B-205ENST00000535900 GJA1P17302 382 aa11.23□□□□□ -0.61
UBE3B-205ENST00000535900 ATF6P18850 670 aa11.23□□□□□ -0.61
UBE3B-205ENST00000535900 GBP1P32455 592 aa11.23□□□□□ -0.61
UBE3B-205ENST00000535900 AIF1P55008 147 aa11.23□□□□□ -0.61
UBE3B-205ENST00000535900 YWHAGP61981 247 aaKnown RBP eCLIP11.23□□□□□ -0.61
UBE3B-205ENST00000535900 AMPD2Q01433 879 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms