RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 BBS2Q9BXC9 721 aa9.26□□□□□ -0.93
CHD4-204ENST00000535810 CNGB3Q9NQW8 809 aa9.26□□□□□ -0.93
CHD4-204ENST00000535810 DNAJC17Q9NVM6 304 aaKnown RBP9.26□□□□□ -0.93
CHD4-204ENST00000535810 DEC1Q9P2X7 70 aa9.26□□□□□ -0.93
CHD4-204ENST00000535810 EBF1Q9UH73 591 aa9.26□□□□□ -0.93
CHD4-204ENST00000535810 GMEB2Q9UKD1 530 aa9.26□□□□□ -0.93
CHD4-204ENST00000535810 RAB23Q9ULC3 237 aa9.26□□□□□ -0.93
CHD4-204ENST00000535810 STRIP2Q9ULQ0 834 aa9.26□□□□□ -0.93
CHD4-204ENST00000535810 MMP17Q9ULZ9 603 aa9.26□□□□□ -0.93
CHD4-204ENST00000535810 SLC12A8A0AV02 714 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 TBC1D3BA6NDS4 549 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 SGK1O00141 431 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 PIK3R2O00459 728 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 TRIM24O15164 1050 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 AXIN1O15169 862 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 RPP40O75818 363 aaKnown RBP9.25□□□□□ -0.93
CHD4-204ENST00000535810 KLF8O95600 359 aaPredicted RBP9.25□□□□□ -0.93
CHD4-204ENST00000535810 PENKP01210 267 aaPredicted RBP9.25□□□□□ -0.93
CHD4-204ENST00000535810 HMBSP08397 361 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 KRT5P13647 590 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 LCP1P13796 627 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 TYRP14679 529 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 HNRNPLP14866 589 aaKnown RBP eCLIP9.25□□□□□ -0.93
CHD4-204ENST00000535810 SLC9A1P19634 815 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 TGM1P22735 817 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 ERCC5P28715 1186 aaPredicted RBP9.25□□□□□ -0.93
CHD4-204ENST00000535810 CORO1AP31146 461 aaKnown RBP9.25□□□□□ -0.93
CHD4-204ENST00000535810 TNFRSF4P43489 277 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 DAOAP59103 153 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 MRPS21P82921 87 aaKnown RBP9.25□□□□□ -0.93
CHD4-204ENST00000535810 CRY1Q16526 586 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 SKOR2Q2VWA4 1001 aaPredicted RBP9.25□□□□□ -0.93
CHD4-204ENST00000535810 HSF5Q4G112 596 aaPredicted RBP9.25□□□□□ -0.93
CHD4-204ENST00000535810 PREPLQ4J6C6 727 aaPredicted RBP9.25□□□□□ -0.93
CHD4-204ENST00000535810 C10orf76Q5T2E6 689 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 EMC10Q5UCC4 262 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 BSPRYQ5W0U4 402 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 GRAMD4Q6IC98 578 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 GBP6Q6ZN66 633 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 CEP68Q76N32 757 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 ENOSF1Q7L5Y1 443 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.25□□□□□ -0.93
CHD4-204ENST00000535810 LAPTM4BQ86VI4 370 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 RASSF3Q86WH2 238 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 SCML4Q8N228 414 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 FAM160A2Q8N612 972 aaPredicted RBP9.25□□□□□ -0.93
CHD4-204ENST00000535810 TXNDC5Q8NBS9 432 aaKnown RBP9.25□□□□□ -0.93
CHD4-204ENST00000535810 EDEM1Q92611 657 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 BHMTQ93088 406 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 PLD4Q96BZ4 506 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 HSFY1Q96LI6 401 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 RTKNQ9BST9 563 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 THAP9Q9H5L6 903 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 PARD6AQ9NPB6 346 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 UBE2TQ9NPD8 197 aaPredicted RBP9.25□□□□□ -0.93
CHD4-204ENST00000535810 ZDHHC4Q9NPG8 344 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 ACP6Q9NPH0 428 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 OLA1Q9NTK5 396 aaKnown RBP9.25□□□□□ -0.93
CHD4-204ENST00000535810 WDR35Q9P2L0 1181 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 APEX2Q9UBZ4 518 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 DACH1Q9UI36 760 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 AGO1Q9UL18 857 aaKnown RBP9.25□□□□□ -0.93
CHD4-204ENST00000535810 HCN2Q9UL51 889 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 ZNF510Q9Y2H8 683 aa9.25□□□□□ -0.93
CHD4-204ENST00000535810 MYO18AQ92614 2054 aaKnown RBP9.25□□□□□ -0.93
CHD4-204ENST00000535810 BECN2A8MW95 431 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 MSI1O43347 362 aaKnown RBP9.24□□□□□ -0.93
CHD4-204ENST00000535810 ADAM23O75077 832 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 RETP07949 1114 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 NDUFV2P19404 249 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 PON1P27169 355 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 GPD2P43304 727 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 MTIF2P46199 727 aaKnown RBP9.24□□□□□ -0.93
CHD4-204ENST00000535810 RPL34P49207 117 aaKnown RBP9.24□□□□□ -0.93
CHD4-204ENST00000535810 DGKEP52429 567 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 MFAP3P55082 362 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 LMNB2Q03252 620 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 TRIP4Q15650 581 aaPredicted RBP9.24□□□□□ -0.93
CHD4-204ENST00000535810 MEA1Q16626 185 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 MAN2A1Q16706 1144 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 TPD52L1Q16890 204 aaPredicted RBP9.24□□□□□ -0.93
CHD4-204ENST00000535810 EXOC3L4Q17RC7 722 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 FYB2Q5VWT5 728 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 ANO7Q6IWH7 933 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 DENND1BQ6P3S1 775 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 TOGARAM2Q6ZUX3 1019 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 KBTBD6Q86V97 674 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 DENND1CQ8IV53 801 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 FMNL3Q8IVF7 1028 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 FAM217AQ8IXS0 508 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 MDGA1Q8NFP4 955 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 GPT2Q8TD30 523 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 CLEC4CQ8WTT0 213 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 RNF139Q8WU17 664 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 IRGQQ8WZA9 623 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 SHC3Q92529 594 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 FAM81BQ96LP2 452 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 XPO6Q96QU8 1125 aaKnown RBP9.24□□□□□ -0.93
CHD4-204ENST00000535810 DCLK3Q9C098 648 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 ABCC13Q9NSE7 274 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms