RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 IQCDQ96DY2 449 aa23.67■■□□□ 1.38
SFSWAP-204ENST00000535399 SEPT11Q9NVA2 429 aaKnown RBP23.67■■□□□ 1.38
SFSWAP-204ENST00000535399 STOML2Q9UJZ1 356 aa23.67■■□□□ 1.38
SFSWAP-204ENST00000535399 CAPN11Q9UMQ6 739 aa23.67■■□□□ 1.38
SFSWAP-204ENST00000535399 TLR6Q9Y2C9 796 aa23.67■■□□□ 1.38
SFSWAP-204ENST00000535399 HCN4Q9Y3Q4 1203 aa23.67■■□□□ 1.38
SFSWAP-204ENST00000535399 LATS1O95835 1130 aa23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 EGFP01133 1207 aa23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 GYPCP04921 128 aa23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 EIF2DP41214 584 aaKnown RBP23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 CDK17Q00537 523 aa23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 LRRC32Q14392 662 aa23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 GAS6Q14393 721 aa23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 ANO4Q32M45 955 aa23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 FAM102AQ5T9C2 384 aaPredicted RBP23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 NUGGCQ68CJ6 796 aa23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 ZNF571Q7Z3V5 609 aaPredicted RBP23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 PHF13Q86YI8 300 aaPredicted RBP23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 UNC45BQ8IWX7 931 aa23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 CPXM2Q8N436 756 aa23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 PRSS33Q8NF86 280 aa23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 EZH1Q92800 747 aaPredicted RBP23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 EXOC4Q96A65 974 aa23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 C11orf70Q9BRQ4 267 aa23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 RBSNQ9H1K0 784 aa23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 KCNH6Q9H252 994 aa23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 HAUS4Q9H6D7 363 aa23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 WDR35Q9P2L0 1181 aa23.66■■□□□ 1.38
SFSWAP-204ENST00000535399 MUC6Q6W4X9 2439 aa23.65■■□□□ 1.38
SFSWAP-204ENST00000535399 GFRA2O00451 464 aa23.65■■□□□ 1.38
SFSWAP-204ENST00000535399 TNFAIP3P21580 790 aa23.65■■□□□ 1.38
SFSWAP-204ENST00000535399 DRD1P21728 446 aa23.65■■□□□ 1.38
SFSWAP-204ENST00000535399 NOS2P35228 1153 aa23.65■■□□□ 1.38
SFSWAP-204ENST00000535399 CHKAP35790 457 aa23.65■■□□□ 1.38
SFSWAP-204ENST00000535399 MATKP42679 507 aa23.65■■□□□ 1.38
SFSWAP-204ENST00000535399 NSFP46459 744 aaKnown RBP23.65■■□□□ 1.38
SFSWAP-204ENST00000535399 ZBED6P86452 979 aa23.65■■□□□ 1.38
SFSWAP-204ENST00000535399 MESP2Q0VG99 397 aa23.65■■□□□ 1.38
SFSWAP-204ENST00000535399 Q6ZS52 159 aa23.65■■□□□ 1.38
SFSWAP-204ENST00000535399 CPLX3Q8WVH0 158 aa23.65■■□□□ 1.38
SFSWAP-204ENST00000535399 SYN2Q92777 582 aaPredicted RBP23.65■■□□□ 1.38
SFSWAP-204ENST00000535399 PRRX2Q99811 253 aa23.65■■□□□ 1.38
SFSWAP-204ENST00000535399 BBS2Q9BXC9 721 aa23.65■■□□□ 1.38
SFSWAP-204ENST00000535399 NUCKS1Q9H1E3 243 aaKnown RBP23.65■■□□□ 1.38
SFSWAP-204ENST00000535399 TMEM59LQ9UK28 342 aa23.65■■□□□ 1.38
SFSWAP-204ENST00000535399 NEDD8-MDP1E9PL57 170 aa23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 GOLGA8SH3BPF8 625 aa23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 AP5Z1O43299 807 aa23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 CACNG3O60359 315 aa23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 PENKP01210 267 aaPredicted RBP23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 TYRP14679 529 aa23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 RNASE9P60153 205 aaKnown RBP23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 KLHL30Q0D2K2 578 aa23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 ADGRF1Q5T601 910 aa23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 OTUD1Q5VV17 481 aaPredicted RBP23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 TRNP1Q6NT89 227 aa23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 MON1BQ7L1V2 547 aa23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 GAS2L3Q86XJ1 694 aa23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 PHTF2Q8N3S3 785 aa23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 SYNPOQ8N3V7 929 aa23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 NAT16Q8N8M0 369 aa23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 AZIN2Q96A70 460 aa23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 ADAM33Q9BZ11 813 aa23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 FAM204AQ9H8W3 233 aa23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.64■■□□□ 1.371e-6■□□□□ 8.4
SFSWAP-204ENST00000535399 ADAM22Q9P0K1 906 aa23.64■■□□□ 1.37
SFSWAP-204ENST00000535399 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.64■■□□□ 1.376e-10■■■■■ 26.8
SFSWAP-204ENST00000535399 TULP3O75386 442 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 SKILP12757 684 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 GSCP56915 257 aaPredicted RBP23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 TCF15Q12870 199 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 MTAPQ13126 283 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 ZC3H12AQ5D1E8 599 aaKnown RBP23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 FYB2Q5VWT5 728 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 SPECC1LQ69YQ0 1117 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 ACAD10Q6JQN1 1059 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 SARM1Q6SZW1 724 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 ARCQ7LC44 396 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 PHLDB2Q86SQ0 1253 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 C1orf210Q8IVY1 113 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 VSTM4Q8IW00 320 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 BHMTQ93088 406 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 NT5C3BQ969T7 300 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 PNKPQ96T60 521 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 NPY6RQ99463 290 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 IER2Q9BTL4 223 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 SPATA6Q9NWH7 488 aaPredicted RBP23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 DDIT4Q9NX09 232 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 TAS2R14Q9NYV8 317 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 LUC7L2Q9Y383 392 aaKnown RBP23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 CACNA1HO95180 2353 aa23.63■■□□□ 1.37
SFSWAP-204ENST00000535399 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.62■■□□□ 1.37
SFSWAP-204ENST00000535399 DDX3XO00571 662 aaKnown RBP eCLIP23.62■■□□□ 1.374e-7■□□□□ 8.8
SFSWAP-204ENST00000535399 ACSL4O60488 711 aa23.62■■□□□ 1.37
SFSWAP-204ENST00000535399 TFE3P19532 575 aaPredicted RBP23.62■■□□□ 1.37
SFSWAP-204ENST00000535399 FLT3P36888 993 aa23.62■■□□□ 1.37
SFSWAP-204ENST00000535399 SLC11A2P49281 568 aa23.62■■□□□ 1.37
SFSWAP-204ENST00000535399 C1QBPQ07021 282 aaKnown RBP23.62■■□□□ 1.37
SFSWAP-204ENST00000535399 FAM133BQ5BKY9 247 aaKnown RBP23.62■■□□□ 1.37
SFSWAP-204ENST00000535399 HGSNATQ68CP4 663 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms