RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 SAFBQ15424 915 aaKnown RBP eCLIP4.13□□□□□ -1.75
USP48-215ENST00000534705 C4orf46Q504U0 113 aa4.13□□□□□ -1.75
USP48-215ENST00000534705 RUSC1-AS1Q66K80 236 aa4.13□□□□□ -1.75
USP48-215ENST00000534705 USP17L6PQ6QN14 398 aa4.13□□□□□ -1.75
USP48-215ENST00000534705 PTCHD4Q6ZW05 846 aa4.13□□□□□ -1.75
USP48-215ENST00000534705 KRT28Q7Z3Y7 464 aa4.13□□□□□ -1.75
USP48-215ENST00000534705 KCTD20Q7Z5Y7 419 aa4.13□□□□□ -1.75
USP48-215ENST00000534705 FAM227BQ96M60 508 aa4.13□□□□□ -1.75
USP48-215ENST00000534705 ZNF48Q96MX3 618 aaPredicted RBP4.13□□□□□ -1.75
USP48-215ENST00000534705 SELENOOQ9BVL4 669 aa4.13□□□□□ -1.75
USP48-215ENST00000534705 SNX15Q9NRS6 342 aa4.13□□□□□ -1.75
USP48-215ENST00000534705 GAR1Q9NY12 217 aaKnown RBP4.13□□□□□ -1.75
USP48-215ENST00000534705 SH3BP4Q9P0V3 963 aa4.13□□□□□ -1.75
USP48-215ENST00000534705 DNAJB11Q9UBS4 358 aa4.13□□□□□ -1.75
USP48-215ENST00000534705 VPS51Q9UID3 782 aa4.13□□□□□ -1.75
USP48-215ENST00000534705 ZNF580Q9UK33 172 aa4.13□□□□□ -1.75
USP48-215ENST00000534705 CCNL1Q9UK58 526 aaPredicted RBP4.13□□□□□ -1.75
USP48-215ENST00000534705 ITGB1BP2Q9UKP3 347 aa4.13□□□□□ -1.75
USP48-215ENST00000534705 AMFRQ9UKV5 643 aa4.13□□□□□ -1.75
USP48-215ENST00000534705 TBC1D30Q9Y2I9 924 aa4.13□□□□□ -1.75
USP48-215ENST00000534705 COL16A1Q07092 1604 aaPredicted RBP4.13□□□□□ -1.75
USP48-215ENST00000534705 PRAG1Q86YV5 1406 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 NRXN1Q9ULB1 1477 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 A0A1W2PPC4 97 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 H3BNC9 293 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 AREL1O15033 823 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 ADAMTS3O15072 1205 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 TMPRSS11DO60235 418 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 CAND2O75155 1236 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 MOSPD3O75425 235 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 VNN1O95497 513 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 FGAP02671 866 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 PRR35P0CG20 571 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 CD19P15391 556 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 KELP23276 732 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 RBL1P28749 1068 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 PIK3CBP42338 1070 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 GATMP50440 423 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 IFIT5Q13325 482 aaKnown RBP4.12□□□□□ -1.75
USP48-215ENST00000534705 ST3GAL2Q16842 350 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 ZNF626Q68DY1 528 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 CCSAPQ6IQ19 270 aaPredicted RBP4.12□□□□□ -1.75
USP48-215ENST00000534705 RNF44Q7L0R7 432 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 LINC01465Q8N7H1 131 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 RNF152Q8N8N0 203 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 TERB1Q8NA31 727 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 ATP11CQ8NB49 1132 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 PJA1Q8NG27 643 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 MBD3L2Q8NHZ7 208 aaPredicted RBP4.12□□□□□ -1.75
USP48-215ENST00000534705 CYP2W1Q8TAV3 490 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 CTHRC1Q96CG8 243 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 APOL5Q9BWW9 433 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 MYH16Q9H6N6 1097 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 NRIP3Q9NQ35 241 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 RIMKLBQ9ULI2 386 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 CORO2BQ9UQ03 480 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 SHPRHQ149N8 1683 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 COL15A1P39059 1388 aa4.12□□□□□ -1.75
USP48-215ENST00000534705 TRPM1Q7Z4N2 1603 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 USP32Q8NFA0 1604 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 TISP43B9A030 160 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 BTBD19C9JJ37 291 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 POC1B-GALNT4F8VUJ3 575 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 KCNQ3O43525 872 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 USP1O94782 785 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 HGFP14210 728 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 CERS1P27544 350 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 SLC5A2P31639 672 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 TM4SF4P48230 202 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 RENBPP51606 427 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 COBLL1Q53SF7 1204 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 RNASE12Q5GAN4 147 aaKnown RBP4.11□□□□□ -1.75
USP48-215ENST00000534705 L1TD1Q5T7N2 865 aaKnown RBP4.11□□□□□ -1.75
USP48-215ENST00000534705 MANEALQ5VSG8 457 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 NAPRTQ6XQN6 538 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 DPY19L3Q6ZPD9 716 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 CATSPERGQ6ZRH7 1159 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 BCDIN3DQ7Z5W3 292 aaKnown RBP4.11□□□□□ -1.75
USP48-215ENST00000534705 DPP9Q86TI2 863 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 GALNT4Q8N4A0 578 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 NGDNQ8NEJ9 315 aaKnown RBP4.11□□□□□ -1.75
USP48-215ENST00000534705 WDYHV1Q96HA8 205 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 MACROD1Q9BQ69 325 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 EIF2AQ9BY44 585 aaKnown RBP4.11□□□□□ -1.75
USP48-215ENST00000534705 CIPCQ9C0C6 399 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 HEYLQ9NQ87 328 aaPredicted RBP4.11□□□□□ -1.75
USP48-215ENST00000534705 STARD7Q9NQZ5 370 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 TFCP2L1Q9NZI6 479 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 MYO1AQ9UBC5 1043 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 STEAP1Q9UHE8 339 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 BTBD3Q9Y2F9 522 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 ABCA3Q99758 1704 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 CRYBG1Q9Y4K1 1723 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 PIK3R4Q99570 1358 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 ANKRD30BQ9BXX2 1392 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 MYOM2P54296 1465 aa4.11□□□□□ -1.75
USP48-215ENST00000534705 ADGRB1O14514 1584 aa4.1□□□□□ -1.75
USP48-215ENST00000534705 AHDC1Q5TGY3 1603 aaPredicted RBP4.1□□□□□ -1.75
USP48-215ENST00000534705 ITSN1Q15811 1721 aa4.1□□□□□ -1.75
USP48-215ENST00000534705 POM121BA6NF01 834 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms