RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	ZMAT1	Q5H9K5	638 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	KHDC1L	Q5JSQ8	128 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	AFMID	Q63HM1	303 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ZNF761	Q86XN6	746 aa	Predicted RBP	5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CMTM4	Q8IZR5	234 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	TDRD5	Q8NAT2	981 aa	Known RBP	5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ACRBP	Q8NEB7	543 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	OR5M3	Q8NGP4	307 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	FAM151A	Q8WW52	585 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	KIAA1191	Q96A73	305 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	S1PR5	Q9H228	398 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	POMK	Q9H5K3	350 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ZNF287	Q9HBT7	754 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	SARS2	Q9NP81	518 aa	Known RBP	5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	TRMT13	Q9NUP7	481 aa	Known RBP	5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	SNX13	Q9Y5W8	968 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	LRRFIP2	Q9Y608	721 aa	Known RBP	5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	SPEF2	Q9C093	1822 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	GREB1	Q4ZG55	1949 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	NRP1	O14786	923 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	NARS	O43776	548 aa	Known RBP	5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	MATN4	O95460	622 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	MMP1	P03956	469 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	HMOX1	P09601	288 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	C6	P13671	934 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	TSHR	P16473	764 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	STT3A	P46977	705 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	APBA1	Q02410	837 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	MRPL49	Q13405	166 aa	Known RBP	5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	TAF1B	Q53T94	588 aa	Predicted RBP	5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	INO80D	Q53TQ3	878 aa	Predicted RBP	5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	FAM209B	Q5JX69	171 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	DGKK	Q5KSL6	1271 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	EMC10	Q5UCC4	262 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	IZUMO3	Q5VZ72	239 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CXCL17	Q6UXB2	119 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	PDZD4	Q76G19	769 aa	Predicted RBP	5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	COPS6	Q7L5N1	327 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	RALYL	Q86SE5	291 aa	Known RBP	5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CHCHD4	Q8N4Q1	142 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	RNF152	Q8N8N0	203 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	VN1R2	Q8NFZ6	395 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	SLC35B2	Q8TB61	432 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	BRIX1	Q8TDN6	353 aa	Known RBP	5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	POF1B	Q8WVV4	589 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	RABGGTA	Q92696	567 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	EVI5L	Q96CN4	794 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	FAM84A	Q96KN4	292 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	THUMPD2	Q9BTF0	503 aa	Known RBP	5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	WDR12	Q9GZL7	423 aa	Known RBP	5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	C11orf54	Q9H0W9	315 aa	Predicted RBP	5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ADAM7	Q9H2U9	754 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	MOCS1	Q9NZB8	636 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	WNT16	Q9UBV4	365 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	MAN2B2	Q9Y2E5	1009 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	RABGAP1	Q9Y3P9	1069 aa		5.23	□□□□□ -1.57
ECHDC1-223	ENST00000534442	NID2	Q14112	1375 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	POM121B	A6NF01	834 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	SHISA7	A6NL88	538 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442		F5H423	210 aa	Predicted RBP	5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	FOXN3	O00409	490 aa	Predicted RBP	5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	TEX33	O43247	280 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ZNF806	P0C7X5	589 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	RAP2A	P10114	183 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	KRT10	P13645	584 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	IL1R1	P14778	569 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	BRAF	P15056	766 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ADSS	P30520	456 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	SLC6A4	P31645	630 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	PIK3CG	P48736	1102 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	GZMK	P49863	264 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	SOX8	P57073	446 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	EXOSC9	Q06265	439 aa	Known RBP	5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CAMK1	Q14012	370 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ZRSR2	Q15696	482 aa	Known RBP	5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	TCTN1	Q2MV58	587 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CCDC152	Q4G0S7	254 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	PABPC1L	Q4VXU2	614 aa	Known RBP	5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	SEM1	Q6ZVN7	128 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	LIX1L	Q8IVB5	337 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	KBTBD2	Q8IY47	623 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	IL17RD	Q8NFM7	739 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	KBTBD7	Q8WVZ9	684 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	MAML1	Q92585	1016 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	LCOR	Q96JN0	433 aa	Predicted RBP	5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CRB3	Q9BUF7	120 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	TRIM54	Q9BYV2	358 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	DPH1	Q9BZG8	443 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	UNK	Q9C0B0	810 aa	Known RBP	5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	AGO3	Q9H9G7	860 aa	Known RBP	5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	PIH1D1	Q9NWS0	290 aa	Known RBP	5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	SIDT1	Q9NXL6	827 aa	Known RBP	5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	GPRC5B	Q9NZH0	403 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	COL20A1	Q9P218	1284 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	DOCK2	Q92608	1830 aa		5.22	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CABIN1	Q9Y6J0	2220 aa		5.21	□□□□□ -1.57
ECHDC1-223	ENST00000534442	PKD1L1	Q8TDX9	2849 aa		5.21	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ZMYM2	Q9UBW7	1377 aa		5.21	□□□□□ -1.58
ECHDC1-223	ENST00000534442	TCRBV7S2A1N4T	A0A589	114 aa		5.21	□□□□□ -1.58
ECHDC1-223	ENST00000534442	UBE2QL1	A1L167	161 aa		5.21	□□□□□ -1.58

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