RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	VPS50	Q96JG6	964 aa		3.99	□□□□□ -1.77
RDX-215	ENST00000533961	ZC3H10	Q96K80	434 aa	Known RBP	3.99	□□□□□ -1.77
RDX-215	ENST00000533961	SELENOO	Q9BVL4	669 aa		3.99	□□□□□ -1.77
RDX-215	ENST00000533961	WDR12	Q9GZL7	423 aa	Known RBP	3.99	□□□□□ -1.77
RDX-215	ENST00000533961	SEPSECS	Q9HD40	501 aa	Known RBP	3.99	□□□□□ -1.77
RDX-215	ENST00000533961	OBP2B	Q9NPH6	170 aa		3.99	□□□□□ -1.77
RDX-215	ENST00000533961	FSCN3	Q9NQT6	498 aa		3.99	□□□□□ -1.77
RDX-215	ENST00000533961	MTMR4	Q9NYA4	1195 aa		3.99	□□□□□ -1.77
RDX-215	ENST00000533961	DNAJB11	Q9UBS4	358 aa		3.99	□□□□□ -1.77
RDX-215	ENST00000533961	ZNF112	Q9UJU3	913 aa		3.99	□□□□□ -1.77
RDX-215	ENST00000533961	TCRBV5S1A1T	A0A578	114 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	LGALS16	A8MUM7	142 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	PPEF2	O14830	753 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	PCDH17	O14917	1159 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	ASNA1	O43681	348 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	PLA2G6	O60733	806 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	SNX2	O60749	519 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	FGB	P02675	491 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	SRGAP2B	P0DMP2	458 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	ALAD	P13716	330 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	CREB1	P16220	341 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	DRD1	P21728	446 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	PDIA3	P30101	505 aa	Known RBP	3.98	□□□□□ -1.77
RDX-215	ENST00000533961	DIO1	P49895	249 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	COPB1	P53618	953 aa	Known RBP	3.98	□□□□□ -1.77
RDX-215	ENST00000533961	COPA	P53621	1224 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	CFHR3	Q02985	330 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	GALNT1	Q10472	559 aa	Predicted RBP	3.98	□□□□□ -1.77
RDX-215	ENST00000533961	BFSP2	Q13515	415 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	LARS2	Q15031	903 aa	Known RBP	3.98	□□□□□ -1.77
RDX-215	ENST00000533961	P3H1	Q32P28	736 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	KRTAP27-1	Q3LI81	207 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	3.98	□□□□□ -1.77
RDX-215	ENST00000533961	KRTAP5-4	Q6L8H1	288 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	BEND5	Q7L4P6	421 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	SYTL1	Q8IYJ3	562 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	CCDC150	Q8NCX0	1101 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	3.98	□□□□□ -1.77
RDX-215	ENST00000533961	CTHRC1	Q96CG8	243 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	C5orf34	Q96MH7	638 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	MMS19	Q96T76	1030 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	TTLL2	Q9BWV7	592 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	SAP30L	Q9HAJ7	183 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	MGAT4C	Q9UBM8	478 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	STEAP1	Q9UHE8	339 aa		3.98	□□□□□ -1.77
RDX-215	ENST00000533961	MAGED2	Q9UNF1	606 aa	Predicted RBP	3.98	□□□□□ -1.77
RDX-215	ENST00000533961	SPATA31A1	Q5TZJ5	1347 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	CCDC187	A0A096LP49	1063 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	SMIM35	A0A1B0GVV1	85 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	CLCA1	A8K7I4	914 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	ERVV-2	B6SEH9	535 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961		J3KTA2	159 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961		M0QYT0	321 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961		M0QZQ0	153 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	AREL1	O15033	823 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	ZSCAN9	O15535	394 aa	Predicted RBP	3.97	□□□□□ -1.77
RDX-215	ENST00000533961	PRAMEF2	O60811	474 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	NBN	O60934	754 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	TOP3B	O95985	862 aa	Known RBP	3.97	□□□□□ -1.77
RDX-215	ENST00000533961	TMEM191B	P0C7N4	346 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	RBL1	P28749	1068 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	MPG	P29372	298 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	AKT1	P31749	480 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	TEC	P42680	631 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	HTR3A	P46098	478 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	HSF1	Q00613	529 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	GHRHR	Q02643	423 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	LMAN2	Q12907	356 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	MTAP	Q13126	283 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	GRM4	Q14833	912 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	LIN54	Q6MZP7	749 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	DLK2	Q6UY11	383 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	P3H2	Q8IVL5	708 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	PNPLA1	Q8N8W4	532 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	GRAMD1A	Q96CP6	724 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	COQ8B	Q96D53	544 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	HIC2	Q96JB3	615 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	COLEC11	Q9BWP8	271 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	STK33	Q9BYT3	514 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	VPS16	Q9H269	839 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	RXFP3	Q9NSD7	469 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	LRFN1	Q9P244	771 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	GRHPR	Q9UBQ7	328 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	PCDHB7	Q9Y5E2	793 aa		3.97	□□□□□ -1.77
RDX-215	ENST00000533961	IGKV2D-30	A0A075B6S6	120 aa		3.96	□□□□□ -1.78
RDX-215	ENST00000533961	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	3.96	□□□□□ -1.78
RDX-215	ENST00000533961	COQ9	O75208	318 aa		3.96	□□□□□ -1.78
RDX-215	ENST00000533961	KRT10	P13645	584 aa		3.96	□□□□□ -1.78
RDX-215	ENST00000533961	EGR1	P18146	543 aa		3.96	□□□□□ -1.78
RDX-215	ENST00000533961	CHKA	P35790	457 aa		3.96	□□□□□ -1.78
RDX-215	ENST00000533961	RAE1	P78406	368 aa	Known RBP	3.96	□□□□□ -1.78
RDX-215	ENST00000533961	SRSF1	Q07955	248 aa	Known RBP eCLIP	3.96	□□□□□ -1.78
RDX-215	ENST00000533961	ZNF268	Q14587	947 aa	Predicted RBP	3.96	□□□□□ -1.78
RDX-215	ENST00000533961	BTBD16	Q32M84	506 aa		3.96	□□□□□ -1.78
RDX-215	ENST00000533961	ZNF260	Q3ZCT1	412 aa		3.96	□□□□□ -1.78
RDX-215	ENST00000533961	TMEM196	Q5HYL7	178 aa		3.96	□□□□□ -1.78
RDX-215	ENST00000533961	TMEM65	Q6PI78	240 aa		3.96	□□□□□ -1.78
RDX-215	ENST00000533961	USP17L6P	Q6QN14	398 aa		3.96	□□□□□ -1.78
RDX-215	ENST00000533961	C12orf76	Q8N812	135 aa	Predicted RBP	3.96	□□□□□ -1.78
RDX-215	ENST00000533961	C16orf52	Q8NHV5	167 aa		3.96	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms