RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 PSTKQ8IV42 348 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 TTC9BQ8N6N2 239 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 SPATA4Q8NEY3 305 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 JOSD2Q8TAC2 188 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 FAM172AQ8WUF8 416 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 PABPC5Q96DU9 382 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 CDK5RAP1Q96SZ6 601 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 ULBP1Q9BZM6 244 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 TRIM7Q9C029 511 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 CRISPLD1Q9H336 500 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 SFXN1Q9H9B4 322 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 ABCC13Q9NSE7 274 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 ZDHHC7Q9NXF8 308 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 CLDND1Q9NY35 253 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 USP18Q9UMW8 372 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 USP3Q9Y6I4 520 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 PLXNA3P51805 1871 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 UQCRHLA0A096LP55 91 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 KRIT1O00522 736 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 ZNF185O15231 689 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 XYLBO75191 536 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 GRAP2O75791 330 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 TJP3O95049 919 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 GJB6O95452 261 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 FGGP02679 453 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 KRT1P04264 644 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 UQCRHP07919 91 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 USP17L7P0C7H9 530 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 GBP1P32455 592 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 FLT3P36888 993 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 RBM10P98175 930 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 MTA1Q13330 715 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 COL19A1Q14993 1142 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 SKIV2LQ15477 1246 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 CCDC85BQ15834 202 aaPredicted RBP11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 ARL13BQ3SXY8 428 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 GLE1Q53GS7 698 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 ITIH5Q86UX2 942 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 MON1AQ86VX9 555 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 VSIG1Q86XK7 387 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 ELMOD1Q8N336 334 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 PDZD8Q8NEN9 1154 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 ZMIZ2Q8NF64 920 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 VN1R2Q8NFZ6 395 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 TEKT4Q8WW24 435 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 ALG3Q92685 438 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 KRT35Q92764 455 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 ZNF512Q96ME7 567 aaPredicted RBP11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 CFAP57Q96MR6 1250 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 SLITRK1Q96PX8 696 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 SLC2A13Q96QE2 648 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 DDX23Q9BUQ8 820 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 RHOBTB2Q9BYZ6 727 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 EFR3BQ9Y2G0 817 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 YIPF1Q9Y548 306 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 ASB3Q9Y575 518 aa11.38□□□□□ -0.59
CCDC90B-218ENST00000533761 CCDC195A0A1B0GUA6 201 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 HHLA1C9JL84 531 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 MDM4O15151 490 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 LINC01565O15544 149 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 TADA3O75528 432 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 RFPL2O75678 378 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 GLP2RO95838 553 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 NCAM1P13591 858 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 RDXP35241 583 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 GJC1P36383 396 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 SULT1E1P49888 294 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 ATP11AP98196 1134 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 OGDHQ02218 1023 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 ZNF252P-AS1Q0IIN9 211 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 TWF1Q12792 350 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 PDK2Q15119 407 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 TAF12Q16514 161 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 DDR2Q16832 855 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 CDO1Q16878 200 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 CCDC14Q49A88 953 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 BTBD8Q5XKL5 378 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 ANKRD54Q6NXT1 300 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 KCTD6Q8NC69 237 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 RNF139Q8WU17 664 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 PPM1EQ8WY54 764 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 RUBCNQ92622 972 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 OLA1Q9NTK5 396 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 FEZ2Q9UHY8 353 aaPredicted RBP11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 SCML2Q9UQR0 700 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 PTPRDP23468 1912 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 LRRD1A4D1F6 860 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 CTIFO43310 598 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 SOAT2O75908 522 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 POU2F2P09086 479 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 RALAP11233 206 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 ATF6P18850 670 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 YWHAQP27348 245 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 MIPP30301 263 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 PTPN7P35236 360 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 MMP16P51512 607 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 ZNF135P52742 658 aaPredicted RBP11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 CACNA2D1P54289 1103 aa11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 YWHAGP61981 247 aaKnown RBP eCLIP11.37□□□□□ -0.59
CCDC90B-218ENST00000533761 SLC25A11Q02978 314 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms