RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 PCDHGB2Q9Y5G2 931 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 CCDC194A0A1B0GVG4 234 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 INO80B-WBP1J3KQ70 363 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 FCHO1O14526 889 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 CTIFO43310 598 aaKnown RBP3.15□□□□□ -1.91
ATM-220ENST00000533526 BCAR3O75815 825 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 MBPP02686 304 aaPredicted RBP3.15□□□□□ -1.91
ATM-220ENST00000533526 SETSIPP0DME0 302 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 ATP5F1P24539 256 aaPredicted RBP3.15□□□□□ -1.91
ATM-220ENST00000533526 PPM1AP35813 382 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 MMP13P45452 471 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 POLE2P56282 527 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 SLC14A1Q13336 389 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 UBE4AQ14139 1066 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 STARD3Q14849 445 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 BRD3Q15059 726 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 P3H1Q32P28 736 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 ARHGAP15Q53QZ3 475 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 ZNF626Q68DY1 528 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 ACSM6Q6P461 480 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 PIK3AP1Q6ZUJ8 805 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 KRT27Q7Z3Y8 459 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 MORC1Q86VD1 984 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 CNGA4Q8IV77 575 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 UEVLDQ8IX04 471 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 NRSN1Q8IZ57 195 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 SAMD3Q8N6K7 520 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.15□□□□□ -1.91
ATM-220ENST00000533526 DENND1AQ8TEH3 1009 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 PIGOQ8TEQ8 1089 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 SMG7Q92540 1137 aaKnown RBP3.15□□□□□ -1.91
ATM-220ENST00000533526 RSC1A1Q92681 617 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 MAP4K1Q92918 833 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 MUL1Q969V5 352 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 PRR11Q96HE9 360 aaPredicted RBP3.15□□□□□ -1.91
ATM-220ENST00000533526 SENP7Q9BQF6 1050 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 SH2D3AQ9BRG2 576 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 PAAF1Q9BRP4 392 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 TTLL2Q9BWV7 592 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 C1QTNF7Q9BXJ2 289 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 ABHD10Q9NUJ1 306 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 FBXO28Q9NVF7 368 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 ARL8BQ9NVJ2 186 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 TUBA8Q9NY65 449 aaPredicted RBP3.15□□□□□ -1.91
ATM-220ENST00000533526 VPS4AQ9UN37 437 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 MAGED2Q9UNF1 606 aaPredicted RBP3.15□□□□□ -1.91
ATM-220ENST00000533526 UBE2J1Q9Y385 318 aaPredicted RBP3.15□□□□□ -1.91
ATM-220ENST00000533526 HEMK1Q9Y5R4 338 aaPredicted RBP3.15□□□□□ -1.91
ATM-220ENST00000533526 SIRT4Q9Y6E7 314 aaPredicted RBP3.15□□□□□ -1.91
ATM-220ENST00000533526 SPATA31A5Q5VU36 1347 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 SPATA31A7Q8IWB4 1347 aa3.15□□□□□ -1.91
ATM-220ENST00000533526 COL3A1P02461 1466 aaPredicted RBP3.15□□□□□ -1.91
ATM-220ENST00000533526 WDR91A4D1P6 747 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 KCNU1A8MYU2 1149 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 J3KTA2 159 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 NPC1O15118 1278 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 FFAR2O15552 330 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 SGPL1O95470 568 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 ENO1P06733 434 aaKnown RBP3.14□□□□□ -1.91
ATM-220ENST00000533526 ANXA6P08133 673 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 NPPBP16860 134 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 HOXD12P35452 270 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 PLCD1P51178 756 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 ALDH18A1P54886 795 aaKnown RBP3.14□□□□□ -1.91
ATM-220ENST00000533526 RPS13P62277 151 aaKnown RBP3.14□□□□□ -1.91
ATM-220ENST00000533526 PTK2BQ14289 1009 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 SUPT20HL1Q3ZLR7 823 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 SYCP2LQ5T4T6 812 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 PXDC1Q5TGL8 231 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 DEF8Q6ZN54 512 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 GATAD2AQ86YP4 633 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 MYLK4Q86YV6 388 aaPredicted RBP3.14□□□□□ -1.91
ATM-220ENST00000533526 ZNF527Q8NB42 609 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 SRFBP1Q8NEF9 429 aaKnown RBP3.14□□□□□ -1.91
ATM-220ENST00000533526 AKAP1Q92667 903 aaKnown RBP eCLIP3.14□□□□□ -1.91
ATM-220ENST00000533526 FAR2Q96K12 515 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 PDGFCQ9NRA1 345 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 SLC52A1Q9NWF4 448 aa3.14□□□□□ -1.91
ATM-220ENST00000533526 ZNF70Q9UC06 446 aaPredicted RBP3.14□□□□□ -1.91
ATM-220ENST00000533526 CCDC187A0A096LP49 1063 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 GXYLT2A0PJZ3 443 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 E5RJQ4 531 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 PIP5K1BO14986 540 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 TP73O15350 636 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 INPPL1O15357 1258 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 DHHO43323 396 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 TAF5LO75529 589 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 FGBP02675 491 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 PTGER1P34995 402 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 ARHGAP25P42331 645 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 VPS41P49754 854 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 ZNF81P51508 661 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 SLC12A2P55011 1212 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 RAE1P78406 368 aaKnown RBP3.13□□□□□ -1.91
ATM-220ENST00000533526 ID2Q02363 134 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 OS9Q13438 667 aaPredicted RBP3.13□□□□□ -1.91
ATM-220ENST00000533526 STIM1Q13586 685 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 MORC3Q14149 939 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 SPARCL1Q14515 664 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 KPNB1Q14974 876 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms