RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 Q6ZNB5 142 aa12.13□□□□□ -0.47
CMTM1-216ENST00000533078 CLEC20AQ6ZU45 233 aa12.13□□□□□ -0.47
CMTM1-216ENST00000533078 CCDC186Q7Z3E2 898 aa12.13□□□□□ -0.47
CMTM1-216ENST00000533078 FAM124AQ86V42 546 aa12.13□□□□□ -0.47
CMTM1-216ENST00000533078 CACUL1Q86Y37 369 aa12.13□□□□□ -0.47
CMTM1-216ENST00000533078 LINC00301Q8NCQ3 95 aa12.13□□□□□ -0.47
CMTM1-216ENST00000533078 DDI1Q8WTU0 396 aa12.13□□□□□ -0.47
CMTM1-216ENST00000533078 HNRNPABQ99729 332 aaKnown RBP12.13□□□□□ -0.47
CMTM1-216ENST00000533078 SLC2A11Q9BYW1 496 aa12.13□□□□□ -0.47
CMTM1-216ENST00000533078 SDCBP2Q9H190 292 aa12.13□□□□□ -0.47
CMTM1-216ENST00000533078 IL21RQ9HBE5 538 aa12.13□□□□□ -0.47
CMTM1-216ENST00000533078 FAM13BQ9NYF5 915 aa12.13□□□□□ -0.47
CMTM1-216ENST00000533078 NUDT5Q9UKK9 219 aa12.13□□□□□ -0.47
CMTM1-216ENST00000533078 PLA2G4CQ9UP65 541 aa12.13□□□□□ -0.47
CMTM1-216ENST00000533078 FNDC3AQ9Y2H6 1198 aaKnown RBP12.13□□□□□ -0.47
CMTM1-216ENST00000533078 BPTFQ12830 3046 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 PLXNB3Q9ULL4 1909 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 A0A1B0GVT2 93 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 PVALEFA0A1B0GWK0 134 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 KCNJ18B7U540 433 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 E9PAM4 449 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 POLR2DO15514 142 aaKnown RBP12.12□□□□□ -0.47
CMTM1-216ENST00000533078 TNFSF14O43557 240 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 CUTAO60888 179 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 PENKP01210 267 aaPredicted RBP12.12□□□□□ -0.47
CMTM1-216ENST00000533078 IGLV3-19P01714 112 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 HMBSP08397 361 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 PGFP49763 221 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 CCT8P50990 548 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 EFEMP1Q12805 493 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 ZNF234Q14588 700 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 TTC31Q49AM3 519 aaPredicted RBP12.12□□□□□ -0.47
CMTM1-216ENST00000533078 FNDC3BQ53EP0 1204 aaKnown RBP12.12□□□□□ -0.47
CMTM1-216ENST00000533078 CCDC157Q569K6 752 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 FYB2Q5VWT5 728 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 GPRIN1Q7Z2K8 1008 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 CEP57L1Q8IYX8 460 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 ZNF276Q8N554 614 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 PDCD7Q8N8D1 485 aaKnown RBP12.12□□□□□ -0.47
CMTM1-216ENST00000533078 OR2T3Q8NH03 318 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 SKA1Q96BD8 255 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 LHX5Q9H2C1 402 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 FBRSQ9HAH7 460 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 CYP3A43Q9HB55 503 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 NMUR1Q9HB89 426 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 EXOC1Q9NV70 894 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 OSER1Q9NX31 292 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 HMGXB4Q9UGU5 601 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.12□□□□□ -0.47
CMTM1-216ENST00000533078 PTPRBP23467 1997 aa12.12□□□□□ -0.47
CMTM1-216ENST00000533078 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.11□□□□□ -0.47
CMTM1-216ENST00000533078 TRABD2BA6NFA1 517 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 IKBKBO14920 756 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 DFNA5O60443 496 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 VNN1O95497 513 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 ASS1P00966 412 aaKnown RBP12.11□□□□□ -0.47
CMTM1-216ENST00000533078 DNTTP04053 509 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 ATXN1LP0C7T5 689 aaKnown RBP12.11□□□□□ -0.47
CMTM1-216ENST00000533078 HNF1BP35680 557 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 ABCG1P45844 678 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 GRIA4P48058 902 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 HARS2P49590 506 aaKnown RBP12.11□□□□□ -0.47
CMTM1-216ENST00000533078 CSNK1EP49674 416 aaKnown RBP12.11□□□□□ -0.47
CMTM1-216ENST00000533078 KIF11P52732 1056 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 ZNF445P59923 1031 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 CYP4F3Q08477 520 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 SFSWAPQ12872 951 aaKnown RBP12.11□□□□□ -0.47
CMTM1-216ENST00000533078 ENPP2Q13822 863 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 ZACNQ401N2 412 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 CEP135Q66GS9 1140 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 DENND1CQ8IV53 801 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 SCUBE3Q8IX30 993 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 TTC39CQ8N584 583 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 BAHD1Q8TBE0 780 aaPredicted RBP12.11□□□□□ -0.47
CMTM1-216ENST00000533078 WFIKKN2Q8TEU8 576 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 IGSF8Q969P0 613 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 BTBD1Q9H0C5 482 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 GZF1Q9H116 711 aaPredicted RBP12.11□□□□□ -0.47
CMTM1-216ENST00000533078 BLZF1Q9H2G9 400 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 MARCH2Q9P0N8 246 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 FTSJ1Q9UET6 329 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 ANKRD6Q9Y2G4 727 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 CABIN1Q9Y6J0 2220 aa12.11□□□□□ -0.47
CMTM1-216ENST00000533078 HHLA1C9JL84 531 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 CALUO43852 315 aaPredicted RBP12.1□□□□□ -0.47
CMTM1-216ENST00000533078 YEATS4O95619 227 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 SEMA4FO95754 770 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 HLA-DRAP01903 254 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 CDK4P11802 303 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 HLA-EP13747 358 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 CD58P19256 250 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 PRKCHP24723 683 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 AFMP43652 599 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 ASPAP45381 313 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 COPAP53621 1224 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 BCAT1P54687 386 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 C21orf59P57076 290 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 ZBTB16Q05516 673 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 EHHADHQ08426 723 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 INCA1Q0VD86 236 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms